| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289977
Identifier: 192289977
GI number: 192289977
Start: 1685067
End: 1685402
Strand: Reverse
Name: 192289977
Synonym: Rpal_1575
Alternate gene names: NA
Gene position: 1685402-1685067 (Counterclockwise)
Preceding gene: 192289978
Following gene: 192289972
Centisome position: 29.34
GC content: 62.2
Gene sequence:
>336_bases ATGACCTTGCCGCTGACCGGTCGTCCGCGTCTCAAGCTGCCCTCTGTCGCCACGGTCGGCGAAGTCGTCGAGATCCGAAC GCTGCTGGAGCATCCGATGGAGACCGGCCTGCGCAAGACGCCGGACGGTCAGCCGATCGCGCGCGATATCCTGGCAAGCT TCATCGCCGAAGCCAACGGCGCGCCGGTACTGAACATCGACTTCCGCAACGCGACATCAGCCAACCCATATCTCATATTC CACGCCCGAATCTCCGGCCCGACCGATTTCAGATTTGTTTGGACCCACGAGGATGGCCGCAGCGTCGATGCCGTCGCGCA TGTGGACGTGAAATAG
Upstream 100 bases:
>100_bases TCGCCGAGAAACAGGCGCTGCTGGTGTTTGCCGAGCACAGCGACGGCACCGTGAACCGCGCCGCCGCTGAGATCAAAGTG AGCGTCGGAGGCTGCCTGAC
Downstream 100 bases:
>100_bases AAGGCTCCGGACGCGCTGCGCCAGGCGCCGGTCAGGCTTGACCTGCACCGGCCGTCAGTCTGGTCGGCGCAATGCCAGAT ATCGGGCGCGCTTGGCGCGT
Product: sulfur oxidation protein SoxZ
Products: NA
Alternate protein names: Sulphur Oxidation Protein SoxZ; Sulfur Oxidation Z Protein; Sulfur Oxidation Protein; Sulphur Oxidation Protein; Chain E Soxyz Complex
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MTLPLTGRPRLKLPSVATVGEVVEIRTLLEHPMETGLRKTPDGQPIARDILASFIAEANGAPVLNIDFRNATSANPYLIF HARISGPTDFRFVWTHEDGRSVDAVAHVDVK
Sequences:
>Translated_111_residues MTLPLTGRPRLKLPSVATVGEVVEIRTLLEHPMETGLRKTPDGQPIARDILASFIAEANGAPVLNIDFRNATSANPYLIF HARISGPTDFRFVWTHEDGRSVDAVAHVDVK >Mature_110_residues TLPLTGRPRLKLPSVATVGEVVEIRTLLEHPMETGLRKTPDGQPIARDILASFIAEANGAPVLNIDFRNATSANPYLIFH ARISGPTDFRFVWTHEDGRSVDAVAHVDVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12185; Mature: 12054
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPLTGRPRLKLPSVATVGEVVEIRTLLEHPMETGLRKTPDGQPIARDILASFIAEANG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC APVLNIDFRNATSANPYLIFHARISGPTDFRFVWTHEDGRSVDAVAHVDVK CCEEEEECCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCEEEEEEEECC >Mature Secondary Structure TLPLTGRPRLKLPSVATVGEVVEIRTLLEHPMETGLRKTPDGQPIARDILASFIAEANG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC APVLNIDFRNATSANPYLIFHARISGPTDFRFVWTHEDGRSVDAVAHVDVK CCEEEEECCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA