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The map label for this gene is insK [C]

Identifier: 192289970

GI number: 192289970

Start: 1675391

End: 1676320

Strand: Reverse

Name: insK [C]

Synonym: Rpal_1567

Alternate gene names: 192289970

Gene position: 1676320-1675391 (Counterclockwise)

Preceding gene: 192289971

Following gene: 192289966

Centisome position: 29.18

GC content: 63.01

Gene sequence:

>930_bases
GTGACGCCCGCGGCCAAGCGGAAAGCTGTCGCGCATCTGCAAACTGCATTCGAGATGAGCGAACGGCGGGCGTGTAAAGC
CATCGGCTGCTGCCGCATGACAGTCAGATATCAGACGAGCCGGAGCGATGATGCCGGGCTGCGCCAACGTATGAGGGCGA
TCGCCCATGAGCGCCGGCGCTTTGGCTATCGGCGCCTCCACGTCCTGCTCAAGCGTGAGGGCTACCTGGTCAATCACAAG
AAGCTGTTCCGGCTGTACCGTGAGGAGAAGCTCACAGTGCGCCGCGGGGGTGGCCGCAAACGGGCCCTCGGCACACGAGC
TCCCATGACAGTGCCGGTGCTCCCGAATGATCGCTGGTCGCTCGACTTCGTGTCGGATCAGATGACCGATGGTCGACGCT
TCCGCATTCTGACTGTGGTCGACGACTGCACCCGCGAGTGCCTGGCGCTGGTGGTCGACACCTCGCTCTCGGGCGCCCGG
GTCGCACGAGAACTGGACCGGCTGGTTGCCGAGAGCGGCAAGCCCAAGATGGTGGTGAGCGACAATGGCAGCGATTTCAC
CAGCAATGCCATCCTGACATGGGCCGATCAGAGCCGTATCGCCTGGCACTACATTGTGCCGGGAAACCCCATGCAAAACG
CCTTCATCGAGAGCTTCAACGGCCGCCTGCGGGATGAACTGCTGAACGAAACGCTGTTCACCTCGCTGGCCCAGGCCCGC
GTAGCGCTCCGGTGCTGGCGGGCCGACTACAATGATGCACGACCGCACTCACAGCTCGGGTGGCGGACGCCATCCGAGTT
CGCCGCCACCTGCAATCCGCGTCGGGATCTGGCGCTGCGAAGCTACCTTGTGGGAGGTCGACCGTCTCTTCATACCTTAA
CAGTCTGTTGCTTCGCAGCGAGGTGTTCTCAGCAACGGTGGCCCCTTTAA

Upstream 100 bases:

>100_bases
GATTGAAGTCGCTGGAGGACGAGAACACCCGGCTGAAGCGGTTGCTGGCCGACGCCATGCTGGACAATGCAGCCCTGAAG
GATCTTCTGGGAAAGAAGTG

Downstream 100 bases:

>100_bases
TTGGCGGGGCACGCCCCCACGACTCCATGTCAGCTATTGACCCAAAGCAGACATCCGCTCCCCCTTTGAATCCAGCCTTG
CCTCGTCATCGCGTCAGGGC

Product: integrase catalytic subunit

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MTPAAKRKAVAHLQTAFEMSERRACKAIGCCRMTVRYQTSRSDDAGLRQRMRAIAHERRRFGYRRLHVLLKREGYLVNHK
KLFRLYREEKLTVRRGGGRKRALGTRAPMTVPVLPNDRWSLDFVSDQMTDGRRFRILTVVDDCTRECLALVVDTSLSGAR
VARELDRLVAESGKPKMVVSDNGSDFTSNAILTWADQSRIAWHYIVPGNPMQNAFIESFNGRLRDELLNETLFTSLAQAR
VALRCWRADYNDARPHSQLGWRTPSEFAATCNPRRDLALRSYLVGGRPSLHTLTVCCFAARCSQQRWPL

Sequences:

>Translated_309_residues
MTPAAKRKAVAHLQTAFEMSERRACKAIGCCRMTVRYQTSRSDDAGLRQRMRAIAHERRRFGYRRLHVLLKREGYLVNHK
KLFRLYREEKLTVRRGGGRKRALGTRAPMTVPVLPNDRWSLDFVSDQMTDGRRFRILTVVDDCTRECLALVVDTSLSGAR
VARELDRLVAESGKPKMVVSDNGSDFTSNAILTWADQSRIAWHYIVPGNPMQNAFIESFNGRLRDELLNETLFTSLAQAR
VALRCWRADYNDARPHSQLGWRTPSEFAATCNPRRDLALRSYLVGGRPSLHTLTVCCFAARCSQQRWPL
>Mature_308_residues
TPAAKRKAVAHLQTAFEMSERRACKAIGCCRMTVRYQTSRSDDAGLRQRMRAIAHERRRFGYRRLHVLLKREGYLVNHKK
LFRLYREEKLTVRRGGGRKRALGTRAPMTVPVLPNDRWSLDFVSDQMTDGRRFRILTVVDDCTRECLALVVDTSLSGARV
ARELDRLVAESGKPKMVVSDNGSDFTSNAILTWADQSRIAWHYIVPGNPMQNAFIESFNGRLRDELLNETLFTSLAQARV
ALRCWRADYNDARPHSQLGWRTPSEFAATCNPRRDLALRSYLVGGRPSLHTLTVCCFAARCSQQRWPL

Specific function: Involved in the transposition of the insertion sequence is150 [C]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1789981, Length=247, Percent_Identity=26.7206477732794, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1790724, Length=241, Percent_Identity=25.3112033195021, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789424, Length=241, Percent_Identity=25.3112033195021, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789224, Length=241, Percent_Identity=25.3112033195021, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788305, Length=241, Percent_Identity=25.3112033195021, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787669, Length=241, Percent_Identity=25.3112033195021, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786558, Length=241, Percent_Identity=25.3112033195021, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 35388; Mature: 35257

Theoretical pI: Translated: 10.93; Mature: 10.93

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPAAKRKAVAHLQTAFEMSERRACKAIGCCRMTVRYQTSRSDDAGLRQRMRAIAHERRR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHH
FGYRRLHVLLKREGYLVNHKKLFRLYREEKLTVRRGGGRKRALGTRAPMTVPVLPNDRWS
HHHHHHHHHHHCCCEEECHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEEECCCCCCE
LDFVSDQMTDGRRFRILTVVDDCTRECLALVVDTSLSGARVARELDRLVAESGKPKMVVS
EEEHHHCCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEE
DNGSDFTSNAILTWADQSRIAWHYIVPGNPMQNAFIESFNGRLRDELLNETLFTSLAQAR
CCCCCCCCCCEEEEECCCCEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
VALRCWRADYNDARPHSQLGWRTPSEFAATCNPRRDLALRSYLVGGRPSLHTLTVCCFAA
HHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
RCSQQRWPL
HHCCCCCCC
>Mature Secondary Structure 
TPAAKRKAVAHLQTAFEMSERRACKAIGCCRMTVRYQTSRSDDAGLRQRMRAIAHERRR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHH
FGYRRLHVLLKREGYLVNHKKLFRLYREEKLTVRRGGGRKRALGTRAPMTVPVLPNDRWS
HHHHHHHHHHHCCCEEECHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEEECCCCCCE
LDFVSDQMTDGRRFRILTVVDDCTRECLALVVDTSLSGARVARELDRLVAESGKPKMVVS
EEEHHHCCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEE
DNGSDFTSNAILTWADQSRIAWHYIVPGNPMQNAFIESFNGRLRDELLNETLFTSLAQAR
CCCCCCCCCCEEEEECCCCEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
VALRCWRADYNDARPHSQLGWRTPSEFAATCNPRRDLALRSYLVGGRPSLHTLTVCCFAA
HHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
RCSQQRWPL
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]