| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289874
Identifier: 192289874
GI number: 192289874
Start: 1546812
End: 1547081
Strand: Reverse
Name: 192289874
Synonym: Rpal_1464
Alternate gene names: NA
Gene position: 1547081-1546812 (Counterclockwise)
Preceding gene: 192289877
Following gene: 192289873
Centisome position: 26.93
GC content: 65.93
Gene sequence:
>270_bases ATGACCACCCGAACGCGCCGCGAAACGATCGTCTTCGCTCACCCATTTCGACTCCGCGGCATCGATCGCGAGCTGCCGGC GGGCGCTTACGACGTCGTCACCGACGAAGAACTGATCGAGGGCCTGTCGTTCCCGGTGTTCCGCCGCGTCGCAACGATGA TCACGGTGCCCTGCGCGCCGCCACGTCAATCCGCGGTAGAAATGCTCACGATCGAACCGGACGCGCTGCGAGACGCGCGA CAAGCCGACAGCAGCACCAGCCGGGCGTGA
Upstream 100 bases:
>100_bases GATGGCTATCGCGCAGGAAAAGGCGCAGCATCAGCAGCGATCATCGCTGCGTAACATGACACGGCCGATGATCGGACGCA GCGGCCCGAAGGAGGCGTCC
Downstream 100 bases:
>100_bases ACCGCGCGGGCCGCCCGCAACACGAGGATGTCCACCATGAGTTTTACCAGCGGCAGCTTTCGCGGTTACGACGAGGACCG CTCCGTGGTGCTGTTTTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MTTRTRRETIVFAHPFRLRGIDRELPAGAYDVVTDEELIEGLSFPVFRRVATMITVPCAPPRQSAVEMLTIEPDALRDAR QADSSTSRA
Sequences:
>Translated_89_residues MTTRTRRETIVFAHPFRLRGIDRELPAGAYDVVTDEELIEGLSFPVFRRVATMITVPCAPPRQSAVEMLTIEPDALRDAR QADSSTSRA >Mature_88_residues TTRTRRETIVFAHPFRLRGIDRELPAGAYDVVTDEELIEGLSFPVFRRVATMITVPCAPPRQSAVEMLTIEPDALRDARQ ADSSTSRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9975; Mature: 9843
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRTRRETIVFAHPFRLRGIDRELPAGAYDVVTDEELIEGLSFPVFRRVATMITVPCAP CCCCCCCCEEEEECCCEECCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCC PRQSAVEMLTIEPDALRDARQADSSTSRA CCCCCEEEEEECCHHHHHHHHCCCCCCCC >Mature Secondary Structure TTRTRRETIVFAHPFRLRGIDRELPAGAYDVVTDEELIEGLSFPVFRRVATMITVPCAP CCCCCCCEEEEECCCEECCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCC PRQSAVEMLTIEPDALRDARQADSSTSRA CCCCCEEEEEECCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA