| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289815
Identifier: 192289815
GI number: 192289815
Start: 1481191
End: 1482186
Strand: Reverse
Name: 192289815
Synonym: Rpal_1405
Alternate gene names: NA
Gene position: 1482186-1481191 (Counterclockwise)
Preceding gene: 192289816
Following gene: 192289814
Centisome position: 25.8
GC content: 64.06
Gene sequence:
>996_bases ATGCCGTTGATCAGCGGGCAAGCAATCGAAACAACTCGCATCAAGCAAAACCTTGCGCGCACGAGTCTCGCCAATCCGGT AGCGGGGGCGCGCACCGATATTACCAGCGTGGTCGGCCGGCTGGCGATCTACGCCGATGGATCCGCGCAACCGGACGGCA ACACGACTCCGCTGCTGCTGATCCACAGCGTCAACGCTGCGGGCTCGGCCTACGAAGTCAAGCCGCTCTACGATTACTAC GCGACGACGCGCCCGGTTTATGCGATCGACCTGCCGGGATTCGGCCAGTCCGATCGCGACGACCGTGAATACACCGCGCG GATGATGACCGACGCGGTCCACGCCGCGGTCGAACAGATCCGCCGCATTCACGGCGAACAGCCGGTCGACGCGCTGGCGC TGTCTCTGGCCAGCGAATTCCTCGCTCGTGCCGCGACCGAGATGCCGCAGGCATTCCGTTCGCTCGGCTTCATCAGCCCG ACCGGATTCGAAGGCAAGGCTCGTGATGCGGGCACGCCCGGCACGCGCGGCCGTTCGTGGATCATCGACACGCTGCGGGT CAAATTGTGGGATCGCGGTTTCTTCAACTTGCTCACGGCCCGGCCGGTGATCCGCAAGTTCCTGGAGAAGGCCTGGGGCT CGAAGACCATCGACGAACCGATGGTGGACTACGATTACGCCACCACGCATCAGCCCGGCGCACGCTACGCCCCGTACTAC TTCGTGGCCGGCTTCATGTTCAGCACCGACATCCTGACCGTCTACGAGCAGCTTCGTCTGCCGGTGTGGATGGCGCACGG GGTGCGCGGCGACTTCGTCGACTACCGGCACAAGAACCGCTTGGCGGGCCGTCCGAACTGGACCCTCGTGCAGTTCGACG CCGGCGCGTTCCCGCACTTCGAGGTGCTGGATCAGGTGGTATCTTCGTACAATCAGTTCCTGGGCAAGCTGCAGCCGAGC GACGTCGGCAAGCCGACTCTCGCACACTCGGTTTGA
Upstream 100 bases:
>100_bases CATTCTTGCCTTTTGGTCGACTCGGAGCGCGCGCGAGTTGGAACCTTCCCGGTTCCACGCGATTGGCTCGACGGTTCGCT CAATTCAAGAGAGGTCGCAG
Downstream 100 bases:
>100_bases GCCCACACTGCGTGACGCAACTCCGCGAGCCACGATCAACAATAGCGTGAGTTGCGTTCGCCTCGCAGTTGAAGAAACTA GACCCAACGCGATCGACTGA
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Hydrolase Fold-Containing Protein
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MPLISGQAIETTRIKQNLARTSLANPVAGARTDITSVVGRLAIYADGSAQPDGNTTPLLLIHSVNAAGSAYEVKPLYDYY ATTRPVYAIDLPGFGQSDRDDREYTARMMTDAVHAAVEQIRRIHGEQPVDALALSLASEFLARAATEMPQAFRSLGFISP TGFEGKARDAGTPGTRGRSWIIDTLRVKLWDRGFFNLLTARPVIRKFLEKAWGSKTIDEPMVDYDYATTHQPGARYAPYY FVAGFMFSTDILTVYEQLRLPVWMAHGVRGDFVDYRHKNRLAGRPNWTLVQFDAGAFPHFEVLDQVVSSYNQFLGKLQPS DVGKPTLAHSV
Sequences:
>Translated_331_residues MPLISGQAIETTRIKQNLARTSLANPVAGARTDITSVVGRLAIYADGSAQPDGNTTPLLLIHSVNAAGSAYEVKPLYDYY ATTRPVYAIDLPGFGQSDRDDREYTARMMTDAVHAAVEQIRRIHGEQPVDALALSLASEFLARAATEMPQAFRSLGFISP TGFEGKARDAGTPGTRGRSWIIDTLRVKLWDRGFFNLLTARPVIRKFLEKAWGSKTIDEPMVDYDYATTHQPGARYAPYY FVAGFMFSTDILTVYEQLRLPVWMAHGVRGDFVDYRHKNRLAGRPNWTLVQFDAGAFPHFEVLDQVVSSYNQFLGKLQPS DVGKPTLAHSV >Mature_330_residues PLISGQAIETTRIKQNLARTSLANPVAGARTDITSVVGRLAIYADGSAQPDGNTTPLLLIHSVNAAGSAYEVKPLYDYYA TTRPVYAIDLPGFGQSDRDDREYTARMMTDAVHAAVEQIRRIHGEQPVDALALSLASEFLARAATEMPQAFRSLGFISPT GFEGKARDAGTPGTRGRSWIIDTLRVKLWDRGFFNLLTARPVIRKFLEKAWGSKTIDEPMVDYDYATTHQPGARYAPYYF VAGFMFSTDILTVYEQLRLPVWMAHGVRGDFVDYRHKNRLAGRPNWTLVQFDAGAFPHFEVLDQVVSSYNQFLGKLQPSD VGKPTLAHSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36752; Mature: 36621
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLISGQAIETTRIKQNLARTSLANPVAGARTDITSVVGRLAIYADGSAQPDGNTTPLLL CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCEEE IHSVNAAGSAYEVKPLYDYYATTRPVYAIDLPGFGQSDRDDREYTARMMTDAVHAAVEQI EEECCCCCCCEECCHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RRIHGEQPVDALALSLASEFLARAATEMPQAFRSLGFISPTGFEGKARDAGTPGTRGRSW HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH IIDTLRVKLWDRGFFNLLTARPVIRKFLEKAWGSKTIDEPMVDYDYATTHQPGARYAPYY HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHH FVAGFMFSTDILTVYEQLRLPVWMAHGVRGDFVDYRHKNRLAGRPNWTLVQFDAGAFPHF HHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHH EVLDQVVSSYNQFLGKLQPSDVGKPTLAHSV HHHHHHHHHHHHHHHCCCCCCCCCCHHHCCC >Mature Secondary Structure PLISGQAIETTRIKQNLARTSLANPVAGARTDITSVVGRLAIYADGSAQPDGNTTPLLL CCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCEEE IHSVNAAGSAYEVKPLYDYYATTRPVYAIDLPGFGQSDRDDREYTARMMTDAVHAAVEQI EEECCCCCCCEECCHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RRIHGEQPVDALALSLASEFLARAATEMPQAFRSLGFISPTGFEGKARDAGTPGTRGRSW HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH IIDTLRVKLWDRGFFNLLTARPVIRKFLEKAWGSKTIDEPMVDYDYATTHQPGARYAPYY HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHH FVAGFMFSTDILTVYEQLRLPVWMAHGVRGDFVDYRHKNRLAGRPNWTLVQFDAGAFPHF HHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHH EVLDQVVSSYNQFLGKLQPSDVGKPTLAHSV HHHHHHHHHHHHHHHCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA