Click here to switch to the map view.

The map label for this gene is nudF [H]

Identifier: 192289671

GI number: 192289671

Start: 1336745

End: 1337188

Strand: Reverse

Name: nudF [H]

Synonym: Rpal_1261

Alternate gene names: 192289671

Gene position: 1337188-1336745 (Counterclockwise)

Preceding gene: 192289672

Following gene: 192289670

Centisome position: 23.28

GC content: 68.92

Gene sequence:

>444_bases
TTGAACGCCGTGACCGAAGCCGCACCGGCGCAGCCGCGCCATCCGCAATTGGCCGTCAGCGCCGCGATCTTCCGCGAGGG
CCGCCTTCTGCTGGTTCGCCGGGCGCGAATGCCGGGCAAAGGCCTGTATTCGCTGCCCGGTGGCCGGGTCGAATTCGGCG
AGACGCTGGAGCAGGCGGCGGTGCGCGAAGTTGCCGAGGAAACCGCGCTGTCGATCCAGATCGTCGGCCTTGCCGGCCGG
CGCGAGGTGCTGCCTTCCGCCGCCAGTGCAGCCGGGCATTACGTCATCATGGTGTTCGCCGCGCGCTGGGCCGGCGGTGA
GCCGCAGCTCAATGGCGAACTCGATGACGCCCGCTGGATCGGCCCTGATCAACTGGCCAACTTTTCGACCACCGAGGGGC
TGGCCGAGCTGGTTGAAGGCGCCCGCGAGCTGATCGGAACCTGA

Upstream 100 bases:

>100_bases
CCGAGAGCGCGGTCGGCTGGATCAAGCCGTTGATCGGTCGCGCCGGCGGCATCATCAACGGCCAAGGCTGCGAAGCCGAC
GTCGACTACATCATGGCGCA

Downstream 100 bases:

>100_bases
TGGCGCTTTCCGGAACCGGCAACTCCTTGCTGCGGCCGATGAAACGGCCTATCAGGCCGGCCATGCTGAAGCGTTCCCTT
GCCGTGCTGATGATCCTCGC

Product: NUDIX hydrolase

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MNAVTEAAPAQPRHPQLAVSAAIFREGRLLLVRRARMPGKGLYSLPGGRVEFGETLEQAAVREVAEETALSIQIVGLAGR
REVLPSAASAAGHYVIMVFAARWAGGEPQLNGELDDARWIGPDQLANFSTTEGLAELVEGARELIGT

Sequences:

>Translated_147_residues
MNAVTEAAPAQPRHPQLAVSAAIFREGRLLLVRRARMPGKGLYSLPGGRVEFGETLEQAAVREVAEETALSIQIVGLAGR
REVLPSAASAAGHYVIMVFAARWAGGEPQLNGELDDARWIGPDQLANFSTTEGLAELVEGARELIGT
>Mature_147_residues
MNAVTEAAPAQPRHPQLAVSAAIFREGRLLLVRRARMPGKGLYSLPGGRVEFGETLEQAAVREVAEETALSIQIVGLAGR
REVLPSAASAAGHYVIMVFAARWAGGEPQLNGELDDARWIGPDQLANFSTTEGLAELVEGARELIGT

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 15630; Mature: 15630

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAVTEAAPAQPRHPQLAVSAAIFREGRLLLVRRARMPGKGLYSLPGGRVEFGETLEQAA
CCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
VREVAEETALSIQIVGLAGRREVLPSAASAAGHYVIMVFAARWAGGEPQLNGELDDARWI
HHHHHHHHHEEEEEEECCCCHHHCCCHHHHCCCEEEEEEEHHCCCCCCCCCCCCCCCCCC
GPDQLANFSTTEGLAELVEGARELIGT
CHHHHCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNAVTEAAPAQPRHPQLAVSAAIFREGRLLLVRRARMPGKGLYSLPGGRVEFGETLEQAA
CCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
VREVAEETALSIQIVGLAGRREVLPSAASAAGHYVIMVFAARWAGGEPQLNGELDDARWI
HHHHHHHHHEEEEEEECCCCHHHCCCHHHHCCCEEEEEEEHHCCCCCCCCCCCCCCCCCC
GPDQLANFSTTEGLAELVEGARELIGT
CHHHHCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]