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The map label for this gene is ygfZ [C]

Identifier: 192289666

GI number: 192289666

Start: 1332863

End: 1333744

Strand: Reverse

Name: ygfZ [C]

Synonym: Rpal_1256

Alternate gene names: 192289666

Gene position: 1333744-1332863 (Counterclockwise)

Preceding gene: 192289669

Following gene: 192289665

Centisome position: 23.22

GC content: 67.8

Gene sequence:

>882_bases
ATGAAGGCAGCCTTCCTCGCCGACCGTGGCGTTCTCAAGATCAGCGGCCCAGACGCGCGGCACCTGCTGAACGGCCTGGT
CACCACCGATTTGAACAGGCTCGAACCCGGCGCCGGCCGGTTCGGCGCCCTGCTGACGCCGCAGGGCAAGATCGTCACTG
ATTTCCTGATCACCGAGCTGCCGGCCGAAGACGATGGCGGCTTCCTGCTGGATTGTCCGAAACCGCTCAGCGAAGCGCTG
GCTACCAAGCTGAAATTCTACAAGCTGCGCGCCAAGGTGCTGATCGAGAACGTGTCCGACCGGCTCGGCGTGCTGGCGCT
ATGGGGCGGCGAACCGTCGCAGCCGCCGGAGATGGGATTCCGCGATCCGCGCGGTGATCAGCTAGGCTGGCGCATCCTGG
TGCCGGAGATCCTGGCCACCGCAACCGCCGAAGCACTCGGCGCCACGATGGTAGCGGCGGACGAGTACGAGGCGCATCGC
ATCGCTTGTGGCGTCCCGGCCGGCGGCCTCGACTTCGGCTATGCGGACGCGTTTCCGCACGAAGCCAATATGGACCGTCT
GTCCGGCGTCGATTTCAACAAGGGCTGCTACATCGGCCAGGAAGTGGTGTCGCGGATGCACCATCGCGGCACCGCGCGTA
CGCGGATCGTGCGCGTGACCTTCGACGGCCCGGCGCCGCAGCCGGGCAGCGAGATCACCGCGGGCGACAAGAGCGTCGGC
ACAATGGGATCGTCGGCGACGGGCCGCGGCCTGGCGCTGCTGCGCATCGACCGTGTTGCCGAGGCGCGCGAGGCGTCGCT
GCCGCTGAGTGCGGGCGGCGTCACCTTGCTGATCGCCGATCCCGACGAGCTGACGCCGGCACCGCGGAAGACCGCCATAT
GA

Upstream 100 bases:

>100_bases
AAGCCTTGTTGACCAGCGCCCGGCCGCCTAACTTGGGATGTCTTAGTCGGCCGGACCGTTTACGCAAGGATGTTTCCGGC
CGGCGTCATGAGAGAGATCA

Downstream 100 bases:

>100_bases
CCCGCGGACCTCGCGTCGGTACCGACGGTCTCATGCGCTGTCCGTGGCCGGGCGACGATCCGCTCTATGTCGCGTATCAC
GACACCGAATGGGGCGTGCC

Product: folate-binding protein YgfZ

Products: NA

Alternate protein names: Aminomethyltransferase; Aminomethyl Transferase Family Protein; Glycine Cleavage T-Protein; Aminomethyltransferase Protein; Glycine Cleavage System T Protein Aminomethyltransferase; Glycine Cleavage T-Protein Barrel; Aminomethyl Transferase; Aminomethyltransferase Family Protein; Glycine Cleavage T-Protein Superfamily Protein; Glycine Cleavage T-Protein C-Terminal Barrel; TRNA-Modifying Protein YgfZ; Aminomethyltransferase Related GcvT; GcvT-Like Aminomethyltransferase Protein; GcvT-Like Aminomethyltransferase

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MKAAFLADRGVLKISGPDARHLLNGLVTTDLNRLEPGAGRFGALLTPQGKIVTDFLITELPAEDDGGFLLDCPKPLSEAL
ATKLKFYKLRAKVLIENVSDRLGVLALWGGEPSQPPEMGFRDPRGDQLGWRILVPEILATATAEALGATMVAADEYEAHR
IACGVPAGGLDFGYADAFPHEANMDRLSGVDFNKGCYIGQEVVSRMHHRGTARTRIVRVTFDGPAPQPGSEITAGDKSVG
TMGSSATGRGLALLRIDRVAEAREASLPLSAGGVTLLIADPDELTPAPRKTAI

Sequences:

>Translated_293_residues
MKAAFLADRGVLKISGPDARHLLNGLVTTDLNRLEPGAGRFGALLTPQGKIVTDFLITELPAEDDGGFLLDCPKPLSEAL
ATKLKFYKLRAKVLIENVSDRLGVLALWGGEPSQPPEMGFRDPRGDQLGWRILVPEILATATAEALGATMVAADEYEAHR
IACGVPAGGLDFGYADAFPHEANMDRLSGVDFNKGCYIGQEVVSRMHHRGTARTRIVRVTFDGPAPQPGSEITAGDKSVG
TMGSSATGRGLALLRIDRVAEAREASLPLSAGGVTLLIADPDELTPAPRKTAI
>Mature_293_residues
MKAAFLADRGVLKISGPDARHLLNGLVTTDLNRLEPGAGRFGALLTPQGKIVTDFLITELPAEDDGGFLLDCPKPLSEAL
ATKLKFYKLRAKVLIENVSDRLGVLALWGGEPSQPPEMGFRDPRGDQLGWRILVPEILATATAEALGATMVAADEYEAHR
IACGVPAGGLDFGYADAFPHEANMDRLSGVDFNKGCYIGQEVVSRMHHRGTARTRIVRVTFDGPAPQPGSEITAGDKSVG
TMGSSATGRGLALLRIDRVAEAREASLPLSAGGVTLLIADPDELTPAPRKTAI

Specific function: Unknown

COG id: COG0354

COG function: function code R; Predicted aminomethyltransferase related to GcvT

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI58197556, Length=286, Percent_Identity=32.5174825174825, Blast_Score=125, Evalue=5e-29,
Organism=Caenorhabditis elegans, GI71985951, Length=278, Percent_Identity=29.8561151079137, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24645123, Length=276, Percent_Identity=28.6231884057971, Blast_Score=109, Evalue=2e-24,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31061; Mature: 31061

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAAFLADRGVLKISGPDARHLLNGLVTTDLNRLEPGAGRFGALLTPQGKIVTDFLITEL
CCCCEEECCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEHHHHHHHC
PAEDDGGFLLDCPKPLSEALATKLKFYKLRAKVLIENVSDRLGVLALWGGEPSQPPEMGF
CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC
RDPRGDQLGWRILVPEILATATAEALGATMVAADEYEAHRIACGVPAGGLDFGYADAFPH
CCCCCCCCCEEEEHHHHHHHHHHHHHCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCC
EANMDRLSGVDFNKGCYIGQEVVSRMHHRGTARTRIVRVTFDGPAPQPGSEITAGDKSVG
CCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC
TMGSSATGRGLALLRIDRVAEAREASLPLSAGGVTLLIADPDELTPAPRKTAI
CCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCCEEEEEECCHHCCCCCCCCCC
>Mature Secondary Structure
MKAAFLADRGVLKISGPDARHLLNGLVTTDLNRLEPGAGRFGALLTPQGKIVTDFLITEL
CCCCEEECCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEHHHHHHHC
PAEDDGGFLLDCPKPLSEALATKLKFYKLRAKVLIENVSDRLGVLALWGGEPSQPPEMGF
CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC
RDPRGDQLGWRILVPEILATATAEALGATMVAADEYEAHRIACGVPAGGLDFGYADAFPH
CCCCCCCCCEEEEHHHHHHHHHHHHHCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCC
EANMDRLSGVDFNKGCYIGQEVVSRMHHRGTARTRIVRVTFDGPAPQPGSEITAGDKSVG
CCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC
TMGSSATGRGLALLRIDRVAEAREASLPLSAGGVTLLIADPDELTPAPRKTAI
CCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCCEEEEEECCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA