| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289661
Identifier: 192289661
GI number: 192289661
Start: 1329673
End: 1330668
Strand: Reverse
Name: 192289661
Synonym: Rpal_1251
Alternate gene names: NA
Gene position: 1330668-1329673 (Counterclockwise)
Preceding gene: 192289662
Following gene: 192289660
Centisome position: 23.17
GC content: 69.68
Gene sequence:
>996_bases ATGAGCCTGCCCTCCGAGATCAGCGACAAGGCCACGGTTCCGATCGAGATCGGACTGACCGCGGCGATCGTCGCGATCGA GGCCAACCAGCCGATGATCCTGACCGCGTCGGGCGACGGCGGAGGCAGCCTCGCCGGCCTGCCCTACGGCCCGTTCGACG CCATCACCCACCGCACCCTGGAGATCGGCTTGCGGGCCTGGGTGGAAGAGCAGACCGGGCTGCGGCTCGGCTATGTCGAG CAGCTCTACACCTTCGGAGACCGCGGCCGTCACGCCCGGCTCGGCGACACCGAGGTTCACGTCGCTTCGATCGGCTATCT GGCGCTGACCCGCGCCGCCGAGAACGCCGCGCGTGCGGCCGGCGCCACCTTCGAACCCTGGTATCGCTTCTTCCCGTGGG AAGACTGGCGCGAACTGCAGCCGGCGATTATCGCGCGCGATATCATCCCCGAACTCACCGCCTGGGCCGCACAGGCCGAG GAGCCGGGGATGGCGCGGGCGCTGGCACGCAAGGATCGAGTGCGGCTGTTCTTCGGCGTGGATGGGGCACCGTGGGACGA GGAGCGCGTGCTCGATCGCTACGAACTGCTTTACGAGGCCGGGTTGATCGAAGAGGCGCGCCGCGACGGCCGCCCGGCGG CGCTGTCGCGCAGCAAGGCGCCGACACTCGGCGTCGCGATGCGGTTCGACCACCGCCGCATCCTCGCCACCGCGATCGCG CGGCTGCGCGCCAAGCTGAAATACCGCCCGGTGGTATTCGAACTTCTCCCGCCCGAGTTCACACTCACCGAATTGCAGCA CACCGTCGAAGCGATCTCCGGCCGGCATCTGCACAAGCAGAATTTCCGCCGCCTGGTGGAAGCCGGCGCGCTGGTCGAAC CGACTGGCGAGATGTCGACACGAACCGGCGGGCGCCCCGCTGCGTTGTTCCGCTTCCGCCGCGAGGTGCTGCAGGAACGG CCCGCCCCCGGCCTGCGCGTGCGCGGCCGGCGGTAA
Upstream 100 bases:
>100_bases ACCGGGCGCTGGGGCGGCAGGGGCGGATGCTGCGCGCCCTCGAGGCGATCGGCCCCGGCGATCTCAGCATCGAGGGCGTG CCGTTTCGCGTCGATCTCGA
Downstream 100 bases:
>100_bases TTCTGTCAAAGCGAAACGCCCCGCCATCTGGGCCGCTCGCCTGGAGGTTGGATGTTCGAGCTACTGGCTTTTGCGATCGC CATCATCGCCTTGGTGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MSLPSEISDKATVPIEIGLTAAIVAIEANQPMILTASGDGGGSLAGLPYGPFDAITHRTLEIGLRAWVEEQTGLRLGYVE QLYTFGDRGRHARLGDTEVHVASIGYLALTRAAENAARAAGATFEPWYRFFPWEDWRELQPAIIARDIIPELTAWAAQAE EPGMARALARKDRVRLFFGVDGAPWDEERVLDRYELLYEAGLIEEARRDGRPAALSRSKAPTLGVAMRFDHRRILATAIA RLRAKLKYRPVVFELLPPEFTLTELQHTVEAISGRHLHKQNFRRLVEAGALVEPTGEMSTRTGGRPAALFRFRREVLQER PAPGLRVRGRR
Sequences:
>Translated_331_residues MSLPSEISDKATVPIEIGLTAAIVAIEANQPMILTASGDGGGSLAGLPYGPFDAITHRTLEIGLRAWVEEQTGLRLGYVE QLYTFGDRGRHARLGDTEVHVASIGYLALTRAAENAARAAGATFEPWYRFFPWEDWRELQPAIIARDIIPELTAWAAQAE EPGMARALARKDRVRLFFGVDGAPWDEERVLDRYELLYEAGLIEEARRDGRPAALSRSKAPTLGVAMRFDHRRILATAIA RLRAKLKYRPVVFELLPPEFTLTELQHTVEAISGRHLHKQNFRRLVEAGALVEPTGEMSTRTGGRPAALFRFRREVLQER PAPGLRVRGRR >Mature_330_residues SLPSEISDKATVPIEIGLTAAIVAIEANQPMILTASGDGGGSLAGLPYGPFDAITHRTLEIGLRAWVEEQTGLRLGYVEQ LYTFGDRGRHARLGDTEVHVASIGYLALTRAAENAARAAGATFEPWYRFFPWEDWRELQPAIIARDIIPELTAWAAQAEE PGMARALARKDRVRLFFGVDGAPWDEERVLDRYELLYEAGLIEEARRDGRPAALSRSKAPTLGVAMRFDHRRILATAIAR LRAKLKYRPVVFELLPPEFTLTELQHTVEAISGRHLHKQNFRRLVEAGALVEPTGEMSTRTGGRPAALFRFRREVLQERP APGLRVRGRR
Specific function: Unknown
COG id: COG4111
COG function: function code R; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36937; Mature: 36806
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPSEISDKATVPIEIGLTAAIVAIEANQPMILTASGDGGGSLAGLPYGPFDAITHRTL CCCCCCCCCCCEEEEEECCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHH EIGLRAWVEEQTGLRLGYVEQLYTFGDRGRHARLGDTEVHVASIGYLALTRAAENAARAA HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCEEEHEEHHHHHHHHHHHHHHHHC GATFEPWYRFFPWEDWRELQPAIIARDIIPELTAWAAQAEEPGMARALARKDRVRLFFGV CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEEC DGAPWDEERVLDRYELLYEAGLIEEARRDGRPAALSRSKAPTLGVAMRFDHRRILATAIA CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHH RLRAKLKYRPVVFELLPPEFTLTELQHTVEAISGRHLHKQNFRRLVEAGALVEPTGEMST HHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEECCCCCCCC RTGGRPAALFRFRREVLQERPAPGLRVRGRR CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SLPSEISDKATVPIEIGLTAAIVAIEANQPMILTASGDGGGSLAGLPYGPFDAITHRTL CCCCCCCCCCEEEEEECCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHH EIGLRAWVEEQTGLRLGYVEQLYTFGDRGRHARLGDTEVHVASIGYLALTRAAENAARAA HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCEEEHEEHHHHHHHHHHHHHHHHC GATFEPWYRFFPWEDWRELQPAIIARDIIPELTAWAAQAEEPGMARALARKDRVRLFFGV CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEEC DGAPWDEERVLDRYELLYEAGLIEEARRDGRPAALSRSKAPTLGVAMRFDHRRILATAIA CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHH RLRAKLKYRPVVFELLPPEFTLTELQHTVEAISGRHLHKQNFRRLVEAGALVEPTGEMST HHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEECCCCCCCC RTGGRPAALFRFRREVLQERPAPGLRVRGRR CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA