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The map label for this gene is 192289638

Identifier: 192289638

GI number: 192289638

Start: 1298515

End: 1299345

Strand: Reverse

Name: 192289638

Synonym: Rpal_1228

Alternate gene names: NA

Gene position: 1299345-1298515 (Counterclockwise)

Preceding gene: 192289642

Following gene: 192289634

Centisome position: 22.62

GC content: 70.76

Gene sequence:

>831_bases
ATGACACCCGATCCCGCGCCGAGCCTGCGTCAATTGCTCGCGTTCTATCTGGACGCAGGGGTGGATTGCGCGCTGGCCGA
GGGTCCGGTCAACCGGATGCTCGACGATGCGCCAGACCCCGCGGCGCGCGAGGCGGCGCCCGAGCCGCGCCCGATCGTCA
AGCCTGCCTTGCACGCCAAGCCGCCCCCACCGCTGGCGTTCGGTGCGCCGCCTGCGAGCCCGGACGCCGCCATCATCTCG
GCGCGCGAAGCCGCCGCGACCGCGCCGACCCTGGAAGCGCTGCGCGAGCTGATGCAGCGGTTCGACGGCTGCGCTTTGCG
CGCGACCGCGACCCAGCTGGTGTTCGCCGACGGCAATCCGCAGGCCAAGGTGATGTTCGTCGGCGAAGCGCCCGGCCGCG
ACGAGGACATCGAAGGGCTGCCGTTCGTCGGCCGCTCCGGCAAGCTGCTCGACCTGATGTTGGCAGCGATCGGACTGAAC
CGCGGCAACGTCTACATCGCCAACGTGATCCCGTGGCGTCCCCCGGGCAACCGCACGCCGACGCCGCAGGAGACCCAGAT
CTGCCTGCCGTTCATCCGGCGCCAGATCGAGCTGGTGAACCCGGACCTGCTGGTGACGCTCGGCAACCCGTCGACCCAGG
CGCTGCTCGGCACCCGCGACGGCATCATGCGCACCCGCGGCCGCTGGTTCGACTACGACACCGGCACCCGCACCATCCGC
GCTCTGCCGACGCTGCATCCGGCCTATCTGCTGCGCCAGCCAACCTACAAGCGGCTCGCCTGGCAAGATCTGCGCGCGAT
CGCCACCGCGCTCGCCGCGACGTCCAACTAA

Upstream 100 bases:

>100_bases
AGCCTCGAGATCATAGATGCGAAAATAAGTTTCGCACCGCGGAACATGATGCAACGAGATCGGCTGTTCTGTTTCGTCCA
TTCACGATAAACCACGCCGC

Downstream 100 bases:

>100_bases
GTAAGATCAAGTAAGAAGGTCAGTTCGTCTGCGCCGGCGCTGCACGGCTACGGCAGACTTACGGCACCTTCGGCCGCACG
ATCGCCCAGCCGATCCGCAG

Product: phage SPO1 DNA polymerase-like protein

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; Uracil DNA Glycosylase Superfamily Protein; DNA Glycosylase; Uracil-DNA Glycosylase Family 4 Protein; DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase-Related Protein; DNA-Directed DNA Polymerase; DNA Polymerase-Related Protein; DNA Polymerase-Related Protein Bacteriophage-Type; Bacteriophage-Related DNA Polymerase; N-Terminus Of Bacteriophage-Type DNA Polymerase; Phage DNA Polymerase; Uracil-DNA Glycosylase C-Terminal Domain Protein; DNA Polymerase Bacteriophage-Type Protein; Phage SPO1 DNA Polymerase Domain-Containing Protein; Phage Related DNA Polymerase; Uracil-DNA Glycosylase C-Terminal; Phage SpO1 DNA Polymerase-Related Protein; Bacteriophage-Type DNA Polymerase; DNA Polymerase Related Protein; Uracil-DNA Glycosylase Phage-Related Protein; Phage Shock Protein E; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; N-Terminus Of Phage SPO1 DNA Polymerase

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MTPDPAPSLRQLLAFYLDAGVDCALAEGPVNRMLDDAPDPAAREAAPEPRPIVKPALHAKPPPPLAFGAPPASPDAAIIS
AREAAATAPTLEALRELMQRFDGCALRATATQLVFADGNPQAKVMFVGEAPGRDEDIEGLPFVGRSGKLLDLMLAAIGLN
RGNVYIANVIPWRPPGNRTPTPQETQICLPFIRRQIELVNPDLLVTLGNPSTQALLGTRDGIMRTRGRWFDYDTGTRTIR
ALPTLHPAYLLRQPTYKRLAWQDLRAIATALAATSN

Sequences:

>Translated_276_residues
MTPDPAPSLRQLLAFYLDAGVDCALAEGPVNRMLDDAPDPAAREAAPEPRPIVKPALHAKPPPPLAFGAPPASPDAAIIS
AREAAATAPTLEALRELMQRFDGCALRATATQLVFADGNPQAKVMFVGEAPGRDEDIEGLPFVGRSGKLLDLMLAAIGLN
RGNVYIANVIPWRPPGNRTPTPQETQICLPFIRRQIELVNPDLLVTLGNPSTQALLGTRDGIMRTRGRWFDYDTGTRTIR
ALPTLHPAYLLRQPTYKRLAWQDLRAIATALAATSN
>Mature_275_residues
TPDPAPSLRQLLAFYLDAGVDCALAEGPVNRMLDDAPDPAAREAAPEPRPIVKPALHAKPPPPLAFGAPPASPDAAIISA
REAAATAPTLEALRELMQRFDGCALRATATQLVFADGNPQAKVMFVGEAPGRDEDIEGLPFVGRSGKLLDLMLAAIGLNR
GNVYIANVIPWRPPGNRTPTPQETQICLPFIRRQIELVNPDLLVTLGNPSTQALLGTRDGIMRTRGRWFDYDTGTRTIRA
LPTLHPAYLLRQPTYKRLAWQDLRAIATALAATSN

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 29804; Mature: 29672

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPDPAPSLRQLLAFYLDAGVDCALAEGPVNRMLDDAPDPAAREAAPEPRPIVKPALHAK
CCCCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHCCCCCHHHHCCCCCCCCCCHHHCCC
PPPPLAFGAPPASPDAAIISAREAAATAPTLEALRELMQRFDGCALRATATQLVFADGNP
CCCCCCCCCCCCCCCHHEEEHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCC
QAKVMFVGEAPGRDEDIEGLPFVGRSGKLLDLMLAAIGLNRGNVYIANVIPWRPPGNRTP
CEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCC
TPQETQICLPFIRRQIELVNPDLLVTLGNPSTQALLGTRDGIMRTRGRWFDYDTGTRTIR
CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCHHHHCCCEEECCCCCCEEE
ALPTLHPAYLLRQPTYKRLAWQDLRAIATALAATSN
CCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TPDPAPSLRQLLAFYLDAGVDCALAEGPVNRMLDDAPDPAAREAAPEPRPIVKPALHAK
CCCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHCCCCCHHHHCCCCCCCCCCHHHCCC
PPPPLAFGAPPASPDAAIISAREAAATAPTLEALRELMQRFDGCALRATATQLVFADGNP
CCCCCCCCCCCCCCCHHEEEHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCC
QAKVMFVGEAPGRDEDIEGLPFVGRSGKLLDLMLAAIGLNRGNVYIANVIPWRPPGNRTP
CEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCC
TPQETQICLPFIRRQIELVNPDLLVTLGNPSTQALLGTRDGIMRTRGRWFDYDTGTRTIR
CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCHHHHCCCEEECCCCCCEEE
ALPTLHPAYLLRQPTYKRLAWQDLRAIATALAATSN
CCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA