| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289620
Identifier: 192289620
GI number: 192289620
Start: 1280163
End: 1280363
Strand: Reverse
Name: 192289620
Synonym: Rpal_1210
Alternate gene names: NA
Gene position: 1280363-1280163 (Counterclockwise)
Preceding gene: 192289628
Following gene: 192289616
Centisome position: 22.29
GC content: 62.69
Gene sequence:
>201_bases ATGAATCTCGATCAAACCGTGCTCGCCTTCGCCGGCACCGTCGTGCTGGTGAGCCTCGCGCTCGGCTGGCTGGTCAGCCC GTATTGGCTGCTGCTGACGGCATTCGCCGGGGTCAATATGATCCAGGCATCGTTCACCGGCTTCTGCCCGGCGGCGATCG TGTTCAAAAAGCTCGGCCGTCCGGCCGGCAATGCGTTTTGA
Upstream 100 bases:
>100_bases GGATCGTCTGTTATTTTCATATTTGCGTATATACAATTATTCGAATATATCGTCAACACGAACCCGGGCGGCCGGGCCGT CACTCAGGAGGAGGACTGCG
Downstream 100 bases:
>100_bases TAAGCGCGCGGCGCATCAAGCGCATCATTGCCGGCTCGACCCAGCAATCCATCACGAAGAGAGTGGCTCCGTCATTGCGA GCGTAGCAAAGCAATCCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 66; Mature: 66
Protein sequence:
>66_residues MNLDQTVLAFAGTVVLVSLALGWLVSPYWLLLTAFAGVNMIQASFTGFCPAAIVFKKLGRPAGNAF
Sequences:
>Translated_66_residues MNLDQTVLAFAGTVVLVSLALGWLVSPYWLLLTAFAGVNMIQASFTGFCPAAIVFKKLGRPAGNAF >Mature_66_residues MNLDQTVLAFAGTVVLVSLALGWLVSPYWLLLTAFAGVNMIQASFTGFCPAAIVFKKLGRPAGNAF
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6990; Mature: 6990
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLDQTVLAFAGTVVLVSLALGWLVSPYWLLLTAFAGVNMIQASFTGFCPAAIVFKKLGR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC PAGNAF CCCCCC >Mature Secondary Structure MNLDQTVLAFAGTVVLVSLALGWLVSPYWLLLTAFAGVNMIQASFTGFCPAAIVFKKLGR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC PAGNAF CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA