| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289602
Identifier: 192289602
GI number: 192289602
Start: 1263456
End: 1263851
Strand: Reverse
Name: 192289602
Synonym: Rpal_1192
Alternate gene names: NA
Gene position: 1263851-1263456 (Counterclockwise)
Preceding gene: 192289603
Following gene: 192289600
Centisome position: 22.0
GC content: 66.67
Gene sequence:
>396_bases ATGGCCAAAGTCGTTTTCTACGAGAAGCCCGGCTGCGTCGGCAACGCGCGGCAGAAGGCGCTGCTCACCGCATCCGGCCA CGAGCTGGAGGTCCGCAACCTGCTCGCCGAGCCATGGACCCGCGAGACGCTGCGGCCGTTCTTCGGCGACAAGCCGCTGA TCGAGTGGTTCAATCAGTCGTCGCCGAAAGTGAAAGCCGGCGCGATCGATTTCGCCGCGCTCGGTGTGGAGGCAGCGCTC GCTCTGATGATCGAGGATCCGCTGCTAATCCGCCGCCCGTTGATGCAGTCGGGCGGCCGCCGCGAAGTCGGATTCGATCA GGCCACCGTTCACGCCTGGCTCGGGCTGCAGACCGGCGGGCCGCGCGTGTTCGACGGCTGCGCGATGGACGATTGA
Upstream 100 bases:
>100_bases TGGTGGGCCGGCATCGCGCCGCGATTGGCGGCACCATCGGCCTGCGGCGCGAACGTCGATGAGCGCGAGCACAAGACGAC CTGTTGAGGGAGCTGTCACG
Downstream 100 bases:
>100_bases CCGCCGATTACTTCGGTTTCCATCCAACCAGATCGATCAGCGCCGATAGTCCGGCGTGGCCGGCGCCCTCGACGATCTCG CTGTCGTGCTCACGGATGCT
Product: nitrogenase-associated protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MAKVVFYEKPGCVGNARQKALLTASGHELEVRNLLAEPWTRETLRPFFGDKPLIEWFNQSSPKVKAGAIDFAALGVEAAL ALMIEDPLLIRRPLMQSGGRREVGFDQATVHAWLGLQTGGPRVFDGCAMDD
Sequences:
>Translated_131_residues MAKVVFYEKPGCVGNARQKALLTASGHELEVRNLLAEPWTRETLRPFFGDKPLIEWFNQSSPKVKAGAIDFAALGVEAAL ALMIEDPLLIRRPLMQSGGRREVGFDQATVHAWLGLQTGGPRVFDGCAMDD >Mature_130_residues AKVVFYEKPGCVGNARQKALLTASGHELEVRNLLAEPWTRETLRPFFGDKPLIEWFNQSSPKVKAGAIDFAALGVEAALA LMIEDPLLIRRPLMQSGGRREVGFDQATVHAWLGLQTGGPRVFDGCAMDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006660 - InterPro: IPR006503 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF03960 ArsC [H]
EC number: NA
Molecular weight: Translated: 14382; Mature: 14251
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVVFYEKPGCVGNARQKALLTASGHELEVRNLLAEPWTRETLRPFFGDKPLIEWFNQS CCEEEEEECCCCCCCCCCEEEEECCCCEEHHHHHHCCCCCHHHHHHHCCCCHHHHHHCCC SPKVKAGAIDFAALGVEAALALMIEDPLLIRRPLMQSGGRREVGFDQATVHAWLGLQTGG CCCEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHEEEEEEEECCCC PRVFDGCAMDD CEEECCCCCCC >Mature Secondary Structure AKVVFYEKPGCVGNARQKALLTASGHELEVRNLLAEPWTRETLRPFFGDKPLIEWFNQS CEEEEEECCCCCCCCCCEEEEECCCCEEHHHHHHCCCCCHHHHHHHCCCCHHHHHHCCC SPKVKAGAIDFAALGVEAALALMIEDPLLIRRPLMQSGGRREVGFDQATVHAWLGLQTGG CCCEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHEEEEEEEECCCC PRVFDGCAMDD CEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2506427 [H]