Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192289551

Identifier: 192289551

GI number: 192289551

Start: 1208874

End: 1209818

Strand: Reverse

Name: 192289551

Synonym: Rpal_1139

Alternate gene names: NA

Gene position: 1209818-1208874 (Counterclockwise)

Preceding gene: 192289555

Following gene: 192289544

Centisome position: 21.06

GC content: 59.79

Gene sequence:

>945_bases
TTGCCCACCAGTTCTGCTGCCGACCGGATCGATGAGATCCGCGACAAGATCGAAAGGCCGCGAACAGCCGCCACCATAAT
CGAGACCGCTCTCCGCAATGCCGGCCACCCCATGACGGTCGACCCCGAAAAGCTTTCGGTCTCATCGGAGTGTATCCATG
AGACCACCGACAGCCGGACCCTGTCGGAGCATGTCTGCGACGCCATGTATCCCCACGAACCCGGCGGCGAATTCTTTCAC
TACACCGGGCGGGATGCATTCAAGGGCATCGCGGCGAACGGCGTTCTCTGGCTCGCCCACCTTCTGAAGCGAATCAAAGA
AAACGAAATTTCGACGCATGCCGACCAGCACGGTCACACGGGATACACCGACGCGGCGAAGAAGGCGGCCTACGTGAACA
CCTTGGCCAAGGACCTTTTCTACACCTCGGTGACGCCGATCGGCGCGACCAACGACGGACCGATGTGGGGTGCATTCGCC
GAGGGCGGCACTGGCGTCCGGCTCCGGCTTCGCATCGAGGTCGATCGGGATCGGCAGCATGGGGAGTTGCGTAAGATCCG
ATATCTGGTGGCCGGCGAGAAAACGCTCCTGAATCGGATCAATGACGACCTCACGGCCGCCGGCTTCTCGGAATTCCTGC
CCTGGACGACCTCCAAGATCGGAGCGTTCTGCCTGCCGAAAGCCATTTACGGCGGCGAATACGAAGTCCGACTGCTGTAC
AAATTCCACCCGGATGTGCTGCCTCACACGCAGAAAGATCCCAGAGACCTTCGAGAGGACAATGGCACGTTCGAATACTG
GAAGCTTCCGCTCAACAAAGACAACGACATCGCTTCCGTTACGCTGCTCGGCATCGAGGCAGGACCGAACGCAGACATGG
CCGAAATACGCAGCATCCTGGCCGGGTCAGGCTTTTCTGGAGTCAATCTCACGCAAGCGCCATGA

Upstream 100 bases:

>100_bases
GCGACCATAAATAGGTGGAGTCCCGCATCTTCGGGGGCTTCTCCCAGGGGCTGGACCGGGCTTGGGAGGAAGCCAATAAA
CCGGTCCAAGGAGGATCTAC

Downstream 100 bases:

>100_bases
CCAACGGTCTTAGACCCGGCTCGAAAACCGCGTGAACGCGGTAAGCCGCTGCACGCTAGGCTCGACGTCGCTCATGTAGA
TCTCGGTCCGCAGGAACGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MPTSSAADRIDEIRDKIERPRTAATIIETALRNAGHPMTVDPEKLSVSSECIHETTDSRTLSEHVCDAMYPHEPGGEFFH
YTGRDAFKGIAANGVLWLAHLLKRIKENEISTHADQHGHTGYTDAAKKAAYVNTLAKDLFYTSVTPIGATNDGPMWGAFA
EGGTGVRLRLRIEVDRDRQHGELRKIRYLVAGEKTLLNRINDDLTAAGFSEFLPWTTSKIGAFCLPKAIYGGEYEVRLLY
KFHPDVLPHTQKDPRDLREDNGTFEYWKLPLNKDNDIASVTLLGIEAGPNADMAEIRSILAGSGFSGVNLTQAP

Sequences:

>Translated_314_residues
MPTSSAADRIDEIRDKIERPRTAATIIETALRNAGHPMTVDPEKLSVSSECIHETTDSRTLSEHVCDAMYPHEPGGEFFH
YTGRDAFKGIAANGVLWLAHLLKRIKENEISTHADQHGHTGYTDAAKKAAYVNTLAKDLFYTSVTPIGATNDGPMWGAFA
EGGTGVRLRLRIEVDRDRQHGELRKIRYLVAGEKTLLNRINDDLTAAGFSEFLPWTTSKIGAFCLPKAIYGGEYEVRLLY
KFHPDVLPHTQKDPRDLREDNGTFEYWKLPLNKDNDIASVTLLGIEAGPNADMAEIRSILAGSGFSGVNLTQAP
>Mature_313_residues
PTSSAADRIDEIRDKIERPRTAATIIETALRNAGHPMTVDPEKLSVSSECIHETTDSRTLSEHVCDAMYPHEPGGEFFHY
TGRDAFKGIAANGVLWLAHLLKRIKENEISTHADQHGHTGYTDAAKKAAYVNTLAKDLFYTSVTPIGATNDGPMWGAFAE
GGTGVRLRLRIEVDRDRQHGELRKIRYLVAGEKTLLNRINDDLTAAGFSEFLPWTTSKIGAFCLPKAIYGGEYEVRLLYK
FHPDVLPHTQKDPRDLREDNGTFEYWKLPLNKDNDIASVTLLGIEAGPNADMAEIRSILAGSGFSGVNLTQAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34735; Mature: 34604

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTSSAADRIDEIRDKIERPRTAATIIETALRNAGHPMTVDPEKLSVSSECIHETTDSRT
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHCCCCHH
LSEHVCDAMYPHEPGGEFFHYTGRDAFKGIAANGVLWLAHLLKRIKENEISTHADQHGHT
HHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GYTDAAKKAAYVNTLAKDLFYTSVTPIGATNDGPMWGAFAEGGTGVRLRLRIEVDRDRQH
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCC
GELRKIRYLVAGEKTLLNRINDDLTAAGFSEFLPWTTSKIGAFCLPKAIYGGEYEVRLLY
CHHHHHHHHHHCCHHHHHHHCCHHHHHCHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEE
KFHPDVLPHTQKDPRDLREDNGTFEYWKLPLNKDNDIASVTLLGIEAGPNADMAEIRSIL
EECCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEEECCCCCCHHHHHHHH
AGSGFSGVNLTQAP
HCCCCCCCCCCCCC
>Mature Secondary Structure 
PTSSAADRIDEIRDKIERPRTAATIIETALRNAGHPMTVDPEKLSVSSECIHETTDSRT
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHCCCCHH
LSEHVCDAMYPHEPGGEFFHYTGRDAFKGIAANGVLWLAHLLKRIKENEISTHADQHGHT
HHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GYTDAAKKAAYVNTLAKDLFYTSVTPIGATNDGPMWGAFAEGGTGVRLRLRIEVDRDRQH
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCC
GELRKIRYLVAGEKTLLNRINDDLTAAGFSEFLPWTTSKIGAFCLPKAIYGGEYEVRLLY
CHHHHHHHHHHCCHHHHHHHCCHHHHHCHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEE
KFHPDVLPHTQKDPRDLREDNGTFEYWKLPLNKDNDIASVTLLGIEAGPNADMAEIRSIL
EECCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEEECCCCCCHHHHHHHH
AGSGFSGVNLTQAP
HCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA