| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289551
Identifier: 192289551
GI number: 192289551
Start: 1208874
End: 1209818
Strand: Reverse
Name: 192289551
Synonym: Rpal_1139
Alternate gene names: NA
Gene position: 1209818-1208874 (Counterclockwise)
Preceding gene: 192289555
Following gene: 192289544
Centisome position: 21.06
GC content: 59.79
Gene sequence:
>945_bases TTGCCCACCAGTTCTGCTGCCGACCGGATCGATGAGATCCGCGACAAGATCGAAAGGCCGCGAACAGCCGCCACCATAAT CGAGACCGCTCTCCGCAATGCCGGCCACCCCATGACGGTCGACCCCGAAAAGCTTTCGGTCTCATCGGAGTGTATCCATG AGACCACCGACAGCCGGACCCTGTCGGAGCATGTCTGCGACGCCATGTATCCCCACGAACCCGGCGGCGAATTCTTTCAC TACACCGGGCGGGATGCATTCAAGGGCATCGCGGCGAACGGCGTTCTCTGGCTCGCCCACCTTCTGAAGCGAATCAAAGA AAACGAAATTTCGACGCATGCCGACCAGCACGGTCACACGGGATACACCGACGCGGCGAAGAAGGCGGCCTACGTGAACA CCTTGGCCAAGGACCTTTTCTACACCTCGGTGACGCCGATCGGCGCGACCAACGACGGACCGATGTGGGGTGCATTCGCC GAGGGCGGCACTGGCGTCCGGCTCCGGCTTCGCATCGAGGTCGATCGGGATCGGCAGCATGGGGAGTTGCGTAAGATCCG ATATCTGGTGGCCGGCGAGAAAACGCTCCTGAATCGGATCAATGACGACCTCACGGCCGCCGGCTTCTCGGAATTCCTGC CCTGGACGACCTCCAAGATCGGAGCGTTCTGCCTGCCGAAAGCCATTTACGGCGGCGAATACGAAGTCCGACTGCTGTAC AAATTCCACCCGGATGTGCTGCCTCACACGCAGAAAGATCCCAGAGACCTTCGAGAGGACAATGGCACGTTCGAATACTG GAAGCTTCCGCTCAACAAAGACAACGACATCGCTTCCGTTACGCTGCTCGGCATCGAGGCAGGACCGAACGCAGACATGG CCGAAATACGCAGCATCCTGGCCGGGTCAGGCTTTTCTGGAGTCAATCTCACGCAAGCGCCATGA
Upstream 100 bases:
>100_bases GCGACCATAAATAGGTGGAGTCCCGCATCTTCGGGGGCTTCTCCCAGGGGCTGGACCGGGCTTGGGAGGAAGCCAATAAA CCGGTCCAAGGAGGATCTAC
Downstream 100 bases:
>100_bases CCAACGGTCTTAGACCCGGCTCGAAAACCGCGTGAACGCGGTAAGCCGCTGCACGCTAGGCTCGACGTCGCTCATGTAGA TCTCGGTCCGCAGGAACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MPTSSAADRIDEIRDKIERPRTAATIIETALRNAGHPMTVDPEKLSVSSECIHETTDSRTLSEHVCDAMYPHEPGGEFFH YTGRDAFKGIAANGVLWLAHLLKRIKENEISTHADQHGHTGYTDAAKKAAYVNTLAKDLFYTSVTPIGATNDGPMWGAFA EGGTGVRLRLRIEVDRDRQHGELRKIRYLVAGEKTLLNRINDDLTAAGFSEFLPWTTSKIGAFCLPKAIYGGEYEVRLLY KFHPDVLPHTQKDPRDLREDNGTFEYWKLPLNKDNDIASVTLLGIEAGPNADMAEIRSILAGSGFSGVNLTQAP
Sequences:
>Translated_314_residues MPTSSAADRIDEIRDKIERPRTAATIIETALRNAGHPMTVDPEKLSVSSECIHETTDSRTLSEHVCDAMYPHEPGGEFFH YTGRDAFKGIAANGVLWLAHLLKRIKENEISTHADQHGHTGYTDAAKKAAYVNTLAKDLFYTSVTPIGATNDGPMWGAFA EGGTGVRLRLRIEVDRDRQHGELRKIRYLVAGEKTLLNRINDDLTAAGFSEFLPWTTSKIGAFCLPKAIYGGEYEVRLLY KFHPDVLPHTQKDPRDLREDNGTFEYWKLPLNKDNDIASVTLLGIEAGPNADMAEIRSILAGSGFSGVNLTQAP >Mature_313_residues PTSSAADRIDEIRDKIERPRTAATIIETALRNAGHPMTVDPEKLSVSSECIHETTDSRTLSEHVCDAMYPHEPGGEFFHY TGRDAFKGIAANGVLWLAHLLKRIKENEISTHADQHGHTGYTDAAKKAAYVNTLAKDLFYTSVTPIGATNDGPMWGAFAE GGTGVRLRLRIEVDRDRQHGELRKIRYLVAGEKTLLNRINDDLTAAGFSEFLPWTTSKIGAFCLPKAIYGGEYEVRLLYK FHPDVLPHTQKDPRDLREDNGTFEYWKLPLNKDNDIASVTLLGIEAGPNADMAEIRSILAGSGFSGVNLTQAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34735; Mature: 34604
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSSAADRIDEIRDKIERPRTAATIIETALRNAGHPMTVDPEKLSVSSECIHETTDSRT CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHCCCCHH LSEHVCDAMYPHEPGGEFFHYTGRDAFKGIAANGVLWLAHLLKRIKENEISTHADQHGHT HHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GYTDAAKKAAYVNTLAKDLFYTSVTPIGATNDGPMWGAFAEGGTGVRLRLRIEVDRDRQH CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCC GELRKIRYLVAGEKTLLNRINDDLTAAGFSEFLPWTTSKIGAFCLPKAIYGGEYEVRLLY CHHHHHHHHHHCCHHHHHHHCCHHHHHCHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEE KFHPDVLPHTQKDPRDLREDNGTFEYWKLPLNKDNDIASVTLLGIEAGPNADMAEIRSIL EECCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEEECCCCCCHHHHHHHH AGSGFSGVNLTQAP HCCCCCCCCCCCCC >Mature Secondary Structure PTSSAADRIDEIRDKIERPRTAATIIETALRNAGHPMTVDPEKLSVSSECIHETTDSRT CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHCCCCHH LSEHVCDAMYPHEPGGEFFHYTGRDAFKGIAANGVLWLAHLLKRIKENEISTHADQHGHT HHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GYTDAAKKAAYVNTLAKDLFYTSVTPIGATNDGPMWGAFAEGGTGVRLRLRIEVDRDRQH CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCC GELRKIRYLVAGEKTLLNRINDDLTAAGFSEFLPWTTSKIGAFCLPKAIYGGEYEVRLLY CHHHHHHHHHHCCHHHHHHHCCHHHHHCHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEE KFHPDVLPHTQKDPRDLREDNGTFEYWKLPLNKDNDIASVTLLGIEAGPNADMAEIRSIL EECCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEEECCCCCCHHHHHHHH AGSGFSGVNLTQAP HCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA