| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289543
Identifier: 192289543
GI number: 192289543
Start: 1203053
End: 1203415
Strand: Reverse
Name: 192289543
Synonym: Rpal_1130
Alternate gene names: NA
Gene position: 1203415-1203053 (Counterclockwise)
Preceding gene: 192289544
Following gene: 192289542
Centisome position: 20.95
GC content: 65.84
Gene sequence:
>363_bases ATGGGCGCGGATTTTCTGCAGAAAGCGGCTCCGCAGTTCGAAAAATGTTGGGACAGGGGGCGCCTAGACCTCGTCACCCA GGATCTCTTCACTCGTCTGCCCACGACCAAGTCGCGGGCGTTCGAAGCGGTTCTGCTCGGGGGCGCCCCGGTGAAGAAGG GCGACAGGATAACGATCGACAAGGTGGGACGCGGGCTCCTGGTGTCGCGCGGCCACACGGAGCTCGCTCTCAGCGAGGAT GCGCCGGCCGCCGTGGTGGCCGCCATCGAGGCGAATTGCGGCGTTGCGCAGGGCATCGTGGACGAGGTCCATGAGATGGC CCGGGTCGTGGAGATCTCCGTATGCATCGCCCGGCCGCAGTAG
Upstream 100 bases:
>100_bases AATAATCGTCTGGCGAGCTTAGCTATGCTCGGTTTGGTTGCGGAGATCAGCCAAGGCCGATCGAAGCGCTACAAGCCTAT TTTCGAAGGGGTTTGATTTC
Downstream 100 bases:
>100_bases ACGACCATAAGCCCGACCGTTTCGAAATTCCCGAGCGCAGGCTCCGGCACGACCGGAATCTCCATCAGATGTCCATGGGG TGCTCCGGATGCGCGGAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MGADFLQKAAPQFEKCWDRGRLDLVTQDLFTRLPTTKSRAFEAVLLGGAPVKKGDRITIDKVGRGLLVSRGHTELALSED APAAVVAAIEANCGVAQGIVDEVHEMARVVEISVCIARPQ
Sequences:
>Translated_120_residues MGADFLQKAAPQFEKCWDRGRLDLVTQDLFTRLPTTKSRAFEAVLLGGAPVKKGDRITIDKVGRGLLVSRGHTELALSED APAAVVAAIEANCGVAQGIVDEVHEMARVVEISVCIARPQ >Mature_119_residues GADFLQKAAPQFEKCWDRGRLDLVTQDLFTRLPTTKSRAFEAVLLGGAPVKKGDRITIDKVGRGLLVSRGHTELALSEDA PAAVVAAIEANCGVAQGIVDEVHEMARVVEISVCIARPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12883; Mature: 12752
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGADFLQKAAPQFEKCWDRGRLDLVTQDLFTRLPTTKSRAFEAVLLGGAPVKKGDRITID CCHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHEEEEECCCCCCCCCEEEHH KVGRGLLVSRGHTELALSEDAPAAVVAAIEANCGVAQGIVDEVHEMARVVEISVCIARPQ HCCCCEEEECCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEECCC >Mature Secondary Structure GADFLQKAAPQFEKCWDRGRLDLVTQDLFTRLPTTKSRAFEAVLLGGAPVKKGDRITID CHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHEEEEECCCCCCCCCEEEHH KVGRGLLVSRGHTELALSEDAPAAVVAAIEANCGVAQGIVDEVHEMARVVEISVCIARPQ HCCCCEEEECCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA