| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289529
Identifier: 192289529
GI number: 192289529
Start: 1184889
End: 1185056
Strand: Reverse
Name: 192289529
Synonym: Rpal_1116
Alternate gene names: NA
Gene position: 1185056-1184889 (Counterclockwise)
Preceding gene: 192289530
Following gene: 192289528
Centisome position: 20.63
GC content: 62.5
Gene sequence:
>168_bases ATGGCGGCCCGTTCGAATCAGGACTGGCGGTTGGAGCTCGTCGAATCCTACGCCGACCTCTTCCACCCGCGCCGGGACCC GCTGTCCGCCGAGGGCTGGCCGCAAGCCTGCCAACCGGGTCAAATTCTCTTACCTTCAACTAACTCCTTTAAACCTTCCC GGCCCTGA
Upstream 100 bases:
>100_bases AAGGGCCGCCTCCGCGTCGTGGTCGGCGCCCGCTACGACTTCGACACCGACGCCTTCGTCGAGATCGACGACGTCGCCGA CCTTCGCAGGGAGGCCTGAC
Downstream 100 bases:
>100_bases ACTCTGGTCTGGAAATTTCGGCGGCTCGCCAGCCAGACTTATCTGACCGTCATACGAATTCGCGGGAGAAGAGGCGCCAG CTGCCCAAAAGCGGGCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 55; Mature: 54
Protein sequence:
>55_residues MAARSNQDWRLELVESYADLFHPRRDPLSAEGWPQACQPGQILLPSTNSFKPSRP
Sequences:
>Translated_55_residues MAARSNQDWRLELVESYADLFHPRRDPLSAEGWPQACQPGQILLPSTNSFKPSRP >Mature_54_residues AARSNQDWRLELVESYADLFHPRRDPLSAEGWPQACQPGQILLPSTNSFKPSRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6266; Mature: 6135
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAARSNQDWRLELVESYADLFHPRRDPLSAEGWPQACQPGQILLPSTNSFKPSRP CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC >Mature Secondary Structure AARSNQDWRLELVESYADLFHPRRDPLSAEGWPQACQPGQILLPSTNSFKPSRP CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA