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The map label for this gene is ybeQ [H]

Identifier: 192289435

GI number: 192289435

Start: 1071230

End: 1072321

Strand: Reverse

Name: ybeQ [H]

Synonym: Rpal_1008

Alternate gene names: 192289435

Gene position: 1072321-1071230 (Counterclockwise)

Preceding gene: 192289436

Following gene: 192289434

Centisome position: 18.67

GC content: 68.96

Gene sequence:

>1092_bases
ATGAAGGCGCTGCGCGCGTTCGCGATTGTTGCGGCTTCACTGCTGCTTGCCACCGGCGCGGCGGCGCAAGTTTCGCTGTC
GCCGCCGTCTGGCCCCAACCCATTCCCGAAGCCGCTGGAGCCGGAAAAGCCGAAGCCCAGGCCGCCGGCCCCGGCCAAGG
CACCCGCCACCGAGGCGAAGGACAAGGCCAAGAAGCCGGGAGACAAACCCGACGCCAAGGCCGCCCCCGAGGGCGGCGCG
GCCGCGGCCGAAGACCCCAACGTCGACCTGGTGTACGGCGCCTATCAGCGCGGCTTCTACAAGACCGCGTTCGAACTGGC
GCAGAAGCGCGCCGCCGACAACGACGCCAAGGCCATGACCATGCTGGGCGAGCTCTATGCCAATGCCCTCGGCGTGAAGC
GCGACTACAAGAAGGCGGCGGAGTGGTACTCGCGAGCGGCCGATCTCGGCGACCGCGAGGCGATGTTTGCCCTCGCCATG
GCCCGGATGGGCGGCCGCGGCGGCCCGCCGAACCGCGAGGAAGCCGCCAAATGGCTGGCGCAGGCTGCCAAGCTTGGCGA
GCCGAAGGCAGCCTATAATCTGGCGCTGCTCTATCTCGACGGCCAGACCTTCCCGCAGGACGTCAAGCGCGCTGCCGAAC
TGCTGCGGATGGCCGCCGATGCCGGCAACCCGGAAGCCCAATACGCGCTGGCGACCTTCTACAAGGAAGGTACCGGGGTA
ACCAAGAGCATCGAGCAGTCGGTGCGGCTGCTGCAGGCCGCCGCACTGGCCGGCAACGTCCCAGCCCAGGTCGAATACGC
CATCGCGCTGTACAACGGTACCGGCACCCCGAAGAACGAGCCGGCCGCCGTCGCGCTGCTGCGCAAGGCGGCGCGCGCCA
ACAACCCGATCGCCCAGAACCGCCTCGCCCATGTGTTGGTCTCCGGCCAGGGCGCGCCGCGCGACATCAACGAGGCGATG
AAATGGCACCTGATCGCCAAGACCGCCGGCAAGGGCGATCTGCAGCTCGACCAGACGCTGGCCCAGATGTCGGCCGAGGA
TCGCGCCAAGGCCGAAGAGGCGGCGCGCACCTGGATTGGCGGCGGCAAATGA

Upstream 100 bases:

>100_bases
TGGGGCGCCGACGATCCCACGGCCGCGCTGGCGGACGCCGGCGAAGCGCTACGTCAAGGCTTCGCTGCCGCCCCCCGGCA
ATGACACATTGGATTCGACG

Downstream 100 bases:

>100_bases
TCCGGGGTTGACGCCGCCCGCCGCAAAGGGCACCCCTTGCGGCCGCAAACCCCACACATCCCCTTCCCGACCAGACCATT
CGCAGGTCGTCACGAGACCA

Product: Sel1 domain-containing protein repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MKALRAFAIVAASLLLATGAAAQVSLSPPSGPNPFPKPLEPEKPKPRPPAPAKAPATEAKDKAKKPGDKPDAKAAPEGGA
AAAEDPNVDLVYGAYQRGFYKTAFELAQKRAADNDAKAMTMLGELYANALGVKRDYKKAAEWYSRAADLGDREAMFALAM
ARMGGRGGPPNREEAAKWLAQAAKLGEPKAAYNLALLYLDGQTFPQDVKRAAELLRMAADAGNPEAQYALATFYKEGTGV
TKSIEQSVRLLQAAALAGNVPAQVEYAIALYNGTGTPKNEPAAVALLRKAARANNPIAQNRLAHVLVSGQGAPRDINEAM
KWHLIAKTAGKGDLQLDQTLAQMSAEDRAKAEEAARTWIGGGK

Sequences:

>Translated_363_residues
MKALRAFAIVAASLLLATGAAAQVSLSPPSGPNPFPKPLEPEKPKPRPPAPAKAPATEAKDKAKKPGDKPDAKAAPEGGA
AAAEDPNVDLVYGAYQRGFYKTAFELAQKRAADNDAKAMTMLGELYANALGVKRDYKKAAEWYSRAADLGDREAMFALAM
ARMGGRGGPPNREEAAKWLAQAAKLGEPKAAYNLALLYLDGQTFPQDVKRAAELLRMAADAGNPEAQYALATFYKEGTGV
TKSIEQSVRLLQAAALAGNVPAQVEYAIALYNGTGTPKNEPAAVALLRKAARANNPIAQNRLAHVLVSGQGAPRDINEAM
KWHLIAKTAGKGDLQLDQTLAQMSAEDRAKAEEAARTWIGGGK
>Mature_363_residues
MKALRAFAIVAASLLLATGAAAQVSLSPPSGPNPFPKPLEPEKPKPRPPAPAKAPATEAKDKAKKPGDKPDAKAAPEGGA
AAAEDPNVDLVYGAYQRGFYKTAFELAQKRAADNDAKAMTMLGELYANALGVKRDYKKAAEWYSRAADLGDREAMFALAM
ARMGGRGGPPNREEAAKWLAQAAKLGEPKAAYNLALLYLDGQTFPQDVKRAAELLRMAADAGNPEAQYALATFYKEGTGV
TKSIEQSVRLLQAAALAGNVPAQVEYAIALYNGTGTPKNEPAAVALLRKAARANNPIAQNRLAHVLVSGQGAPRDINEAM
KWHLIAKTAGKGDLQLDQTLAQMSAEDRAKAEEAARTWIGGGK

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=183, Percent_Identity=29.5081967213115, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI151301150, Length=162, Percent_Identity=32.0987654320988, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI217330658, Length=168, Percent_Identity=31.547619047619, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI217330656, Length=168, Percent_Identity=31.547619047619, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI87081769, Length=257, Percent_Identity=31.1284046692607, Blast_Score=89, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17563256, Length=225, Percent_Identity=31.1111111111111, Blast_Score=88, Evalue=6e-18,
Organism=Saccharomyces cerevisiae, GI6319410, Length=254, Percent_Identity=30.7086614173228, Blast_Score=63, Evalue=7e-11,
Organism=Drosophila melanogaster, GI21355295, Length=179, Percent_Identity=27.3743016759777, Blast_Score=66, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 38325; Mature: 38325

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALRAFAIVAASLLLATGAAAQVSLSPPSGPNPFPKPLEPEKPKPRPPAPAKAPATEAK
CHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
DKAKKPGDKPDAKAAPEGGAAAAEDPNVDLVYGAYQRGFYKTAFELAQKRAADNDAKAMT
HHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCHHHHHH
MLGELYANALGVKRDYKKAAEWYSRAADLGDREAMFALAMARMGGRGGPPNREEAAKWLA
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
QAAKLGEPKAAYNLALLYLDGQTFPQDVKRAAELLRMAADAGNPEAQYALATFYKEGTGV
HHHHCCCCCHHEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCH
TKSIEQSVRLLQAAALAGNVPAQVEYAIALYNGTGTPKNEPAAVALLRKAARANNPIAQN
HHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHH
RLAHVLVSGQGAPRDINEAMKWHLIAKTAGKGDLQLDQTLAQMSAEDRAKAEEAARTWIG
HHHEEEECCCCCCHHHHHHHHEEHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
GGK
CCC
>Mature Secondary Structure
MKALRAFAIVAASLLLATGAAAQVSLSPPSGPNPFPKPLEPEKPKPRPPAPAKAPATEAK
CHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
DKAKKPGDKPDAKAAPEGGAAAAEDPNVDLVYGAYQRGFYKTAFELAQKRAADNDAKAMT
HHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCHHHHHH
MLGELYANALGVKRDYKKAAEWYSRAADLGDREAMFALAMARMGGRGGPPNREEAAKWLA
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
QAAKLGEPKAAYNLALLYLDGQTFPQDVKRAAELLRMAADAGNPEAQYALATFYKEGTGV
HHHHCCCCCHHEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCH
TKSIEQSVRLLQAAALAGNVPAQVEYAIALYNGTGTPKNEPAAVALLRKAARANNPIAQN
HHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHH
RLAHVLVSGQGAPRDINEAMKWHLIAKTAGKGDLQLDQTLAQMSAEDRAKAEEAARTWIG
HHHEEEECCCCCCHHHHHHHHEEHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
GGK
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]