| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is yjaB [C]
Identifier: 192289417
GI number: 192289417
Start: 1055989
End: 1056435
Strand: Reverse
Name: yjaB [C]
Synonym: Rpal_0990
Alternate gene names: 192289417
Gene position: 1056435-1055989 (Counterclockwise)
Preceding gene: 192289418
Following gene: 192289415
Centisome position: 18.39
GC content: 66.89
Gene sequence:
>447_bases ATGCCCACCTTCACCCTCCGCCCCTACACCGAAGCCGACGAAGACCCCGCTATCGCGCTGTGGCTGCGGACCTGGCAGCT CGCCTACCCGGCGATCGACTTCACCAAGCGGGTCGACTGGTGGCGCGAGCGCTGGCGCACCGAGCTGGTGCCGCAAGCCG CCATCATCGTCGCCGAGCAGGACAGCGCCCTCATCGGCTTCGTCACCATCGACGCGGCCGGTTATCTCGATCAGCTCGTG GTCGAACCCGAGCATTGGGGCTGGGGTGTCGCCGAGGCGCTGGTAGATGAAGCCAAGCGCCGCTCGCCGACCGAGGTCAC CCTCAAGGTCAACGCCGACAACTACCGCGCCATCAAGTTCTATCGTCGCAACGGCTTCGCGGTGACGGGCGAGGAGCTCA ACAGCTCCGGCCGGCCGGTGCTGAACATGCTGTGGAGGCCGGCTTAG
Upstream 100 bases:
>100_bases GCGCGCGTAGCGCGAACCCGGAATCTCGACCAGCGCCCTTGTCAGATTCCGGGTTCGCGCTACGCGCGCCCCGGAGTGAC GTAGCATTTGGTTGATCAGC
Downstream 100 bases:
>100_bases CGTGTCATCAGTTCAACCAGCACAATAGTCATCCTCCGCGAATGTGGAGGATCCAGTATTCCGAAGCGTTGCTTTGGAAG TGAAAGGCTCGGGCTACTGG
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; GCN5-Like N-Acetyltransferase; Acetyltransferase YjaB
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MPTFTLRPYTEADEDPAIALWLRTWQLAYPAIDFTKRVDWWRERWRTELVPQAAIIVAEQDSALIGFVTIDAAGYLDQLV VEPEHWGWGVAEALVDEAKRRSPTEVTLKVNADNYRAIKFYRRNGFAVTGEELNSSGRPVLNMLWRPA
Sequences:
>Translated_148_residues MPTFTLRPYTEADEDPAIALWLRTWQLAYPAIDFTKRVDWWRERWRTELVPQAAIIVAEQDSALIGFVTIDAAGYLDQLV VEPEHWGWGVAEALVDEAKRRSPTEVTLKVNADNYRAIKFYRRNGFAVTGEELNSSGRPVLNMLWRPA >Mature_147_residues PTFTLRPYTEADEDPAIALWLRTWQLAYPAIDFTKRVDWWRERWRTELVPQAAIIVAEQDSALIGFVTIDAAGYLDQLVV EPEHWGWGVAEALVDEAKRRSPTEVTLKVNADNYRAIKFYRRNGFAVTGEELNSSGRPVLNMLWRPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.-
Molecular weight: Translated: 17035; Mature: 16904
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTFTLRPYTEADEDPAIALWLRTWQLAYPAIDFTKRVDWWRERWRTELVPQAAIIVAEQ CCCCCCCCCCCCCCCCEEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEC DSALIGFVTIDAAGYLDQLVVEPEHWGWGVAEALVDEAKRRSPTEVTLKVNADNYRAIKF CCEEEEEEEECCCCHHHHHEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEE YRRNGFAVTGEELNSSGRPVLNMLWRPA EECCCEEEEHHHCCCCCCHHHHHCCCCC >Mature Secondary Structure PTFTLRPYTEADEDPAIALWLRTWQLAYPAIDFTKRVDWWRERWRTELVPQAAIIVAEQ CCCCCCCCCCCCCCCEEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEC DSALIGFVTIDAAGYLDQLVVEPEHWGWGVAEALVDEAKRRSPTEVTLKVNADNYRAIKF CCEEEEEEEECCCCHHHHHEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEE YRRNGFAVTGEELNSSGRPVLNMLWRPA EECCCEEEEHHHCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA