| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289380
Identifier: 192289380
GI number: 192289380
Start: 1013011
End: 1014009
Strand: Reverse
Name: 192289380
Synonym: Rpal_0952
Alternate gene names: NA
Gene position: 1014009-1013011 (Counterclockwise)
Preceding gene: 192289381
Following gene: 192289379
Centisome position: 17.65
GC content: 65.87
Gene sequence:
>999_bases ATGCGCAGAGTTGTCGCCGCCCTGTTCGCCGTCCTGCTGACCGCCGTGCCGGCGGCTGCGCAGACGCCGCTGAAGATCAT GGTGGGCGGCATCGACAAGCAGATCTATCTGCCGGCCAAGCTCGCCGCCCAGCTCGGTTTCTTCAAGGAGGAAGGGCTCG ATGTTGAGCTGTTCAACTCCACCTCAGGCTCGCAGGCCGCCACCGCGCTGTTGGCGCGCGAAGTCCAGGGCGTCGTCGGA TTCTACGATCACACCATCGACCTGCAGGCCAAGGGCAAGTTCATCACCGACGTGGTGCAGTTCTCGGTCGCGCCCGGCGA GGTCGTGCTGGTGAAGGCGGCCGAAGCTGACAAGCTGAAGCAGCCCGCGAACTGGAAGGGCTTGGCGCTCGGCGTGACCG GCCTCGGCTCGGCCACCGACTTTCTCACCCGCGCGCTCGCCGCCAAGGCCGGCCTGAAGATGCAGGACTACACGCTGGTG CCGGTCGGCGCCGGCGACACCTTCCTGGCGGCGATGCAGCAGGGCAAGATCAGCTCGGGCATGACCACCGAGCCGACCGT GCAGCGCGCGCTGAGTTCAGGCACCGCCAAGATCGGCATCGACCTGCGCTCGCCGGAGCAGACCCGCAAGGCGCTCGGCG GCGACTATCCGGCCGCTTGCCTGTACATGGACCGCGGCTGGATGGAGGCAAACAAGCCCACCGTGCAGAAGCTGGTGAAC GCCTTCGTCAAGACGCTGAAATGGATCCAGGCGCATTCGGCCGAAGAGATCGCCGACAAGATGCCGAAGGATTACTACGC CGGCGACCGCGCCCTCTACGTCCAAGGCCTGCAGGACGGCAAGGTGCAGTACTCGCCCGACGGCATGATGCCGGCCGGCG CTCCGGAATCCGTCGCCAAGATCCTTGCCAGCTTCTCGCCCAACCTGCAGGGCAAGACGATCGATCTGGCCAAGACCTAC ACGACGGAGTTCGTGGTGAAGGCGAATGCGGGCCAGTGA
Upstream 100 bases:
>100_bases CGCGACCGGCATTGACAGATTGCCGCACCCCGGGTCCTGATGCGTGAGCCTTGTCGCGGCCCCTGCGGGCACGACAAGCG AACGTCATGAGGAAACGCCG
Downstream 100 bases:
>100_bases GTCTGCCCGGCAGCAGATCATGCGCCGCGTGATGGCCCGCGGCATGTTCGACTATGAGCGCTGTTGGAACATGAGGGGTC CGCCCCGAGACGTGCCCCGC
Product: ABC transporter substrate-binding protein
Products: NA
Alternate protein names: NMT1/THI5-Like Domain-Containing Protein; Signal Peptide Protein; Amino Acid ABC Transporter; NMT1/THI5 Like Domain-Containing Protein; Twin-Arginine Translocation Pathway Signal; Twin-Arginine Translocation Pathway Signal Protein; ABC Transporter Protein
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MRRVVAALFAVLLTAVPAAAQTPLKIMVGGIDKQIYLPAKLAAQLGFFKEEGLDVELFNSTSGSQAATALLAREVQGVVG FYDHTIDLQAKGKFITDVVQFSVAPGEVVLVKAAEADKLKQPANWKGLALGVTGLGSATDFLTRALAAKAGLKMQDYTLV PVGAGDTFLAAMQQGKISSGMTTEPTVQRALSSGTAKIGIDLRSPEQTRKALGGDYPAACLYMDRGWMEANKPTVQKLVN AFVKTLKWIQAHSAEEIADKMPKDYYAGDRALYVQGLQDGKVQYSPDGMMPAGAPESVAKILASFSPNLQGKTIDLAKTY TTEFVVKANAGQ
Sequences:
>Translated_332_residues MRRVVAALFAVLLTAVPAAAQTPLKIMVGGIDKQIYLPAKLAAQLGFFKEEGLDVELFNSTSGSQAATALLAREVQGVVG FYDHTIDLQAKGKFITDVVQFSVAPGEVVLVKAAEADKLKQPANWKGLALGVTGLGSATDFLTRALAAKAGLKMQDYTLV PVGAGDTFLAAMQQGKISSGMTTEPTVQRALSSGTAKIGIDLRSPEQTRKALGGDYPAACLYMDRGWMEANKPTVQKLVN AFVKTLKWIQAHSAEEIADKMPKDYYAGDRALYVQGLQDGKVQYSPDGMMPAGAPESVAKILASFSPNLQGKTIDLAKTY TTEFVVKANAGQ >Mature_332_residues MRRVVAALFAVLLTAVPAAAQTPLKIMVGGIDKQIYLPAKLAAQLGFFKEEGLDVELFNSTSGSQAATALLAREVQGVVG FYDHTIDLQAKGKFITDVVQFSVAPGEVVLVKAAEADKLKQPANWKGLALGVTGLGSATDFLTRALAAKAGLKMQDYTLV PVGAGDTFLAAMQQGKISSGMTTEPTVQRALSSGTAKIGIDLRSPEQTRKALGGDYPAACLYMDRGWMEANKPTVQKLVN AFVKTLKWIQAHSAEEIADKMPKDYYAGDRALYVQGLQDGKVQYSPDGMMPAGAPESVAKILASFSPNLQGKTIDLAKTY TTEFVVKANAGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35279; Mature: 35279
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVVAALFAVLLTAVPAAAQTPLKIMVGGIDKQIYLPAKLAAQLGFFKEEGLDVELFNS CHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEHHHHHHHHCCHHHCCCCEEEECC TSGSQAATALLAREVQGVVGFYDHTIDLQAKGKFITDVVQFSVAPGEVVLVKAAEADKLK CCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCCCCEEEEEECCHHHCC QPANWKGLALGVTGLGSATDFLTRALAAKAGLKMQDYTLVPVGAGDTFLAAMQQGKISSG CCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCCCCCC MTTEPTVQRALSSGTAKIGIDLRSPEQTRKALGGDYPAACLYMDRGWMEANKPTVQKLVN CCCCHHHHHHHHCCCEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHH AFVKTLKWIQAHSAEEIADKMPKDYYAGDRALYVQGLQDGKVQYSPDGMMPAGAPESVAK HHHHHHHHHHHCCHHHHHHHCCHHHCCCCEEEEEECCCCCCEEECCCCCCCCCCHHHHHH ILASFSPNLQGKTIDLAKTYTTEFVVKANAGQ HHHHCCCCCCCCEEEEEEEECEEEEEEECCCC >Mature Secondary Structure MRRVVAALFAVLLTAVPAAAQTPLKIMVGGIDKQIYLPAKLAAQLGFFKEEGLDVELFNS CHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEHHHHHHHHCCHHHCCCCEEEECC TSGSQAATALLAREVQGVVGFYDHTIDLQAKGKFITDVVQFSVAPGEVVLVKAAEADKLK CCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCCCCEEEEEECCHHHCC QPANWKGLALGVTGLGSATDFLTRALAAKAGLKMQDYTLVPVGAGDTFLAAMQQGKISSG CCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCCCCCC MTTEPTVQRALSSGTAKIGIDLRSPEQTRKALGGDYPAACLYMDRGWMEANKPTVQKLVN CCCCHHHHHHHHCCCEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHH AFVKTLKWIQAHSAEEIADKMPKDYYAGDRALYVQGLQDGKVQYSPDGMMPAGAPESVAK HHHHHHHHHHHCCHHHHHHHCCHHHCCCCEEEEEECCCCCCEEECCCCCCCCCCHHHHHH ILASFSPNLQGKTIDLAKTYTTEFVVKANAGQ HHHHCCCCCCCCEEEEEEEECEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA