Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192289380

Identifier: 192289380

GI number: 192289380

Start: 1013011

End: 1014009

Strand: Reverse

Name: 192289380

Synonym: Rpal_0952

Alternate gene names: NA

Gene position: 1014009-1013011 (Counterclockwise)

Preceding gene: 192289381

Following gene: 192289379

Centisome position: 17.65

GC content: 65.87

Gene sequence:

>999_bases
ATGCGCAGAGTTGTCGCCGCCCTGTTCGCCGTCCTGCTGACCGCCGTGCCGGCGGCTGCGCAGACGCCGCTGAAGATCAT
GGTGGGCGGCATCGACAAGCAGATCTATCTGCCGGCCAAGCTCGCCGCCCAGCTCGGTTTCTTCAAGGAGGAAGGGCTCG
ATGTTGAGCTGTTCAACTCCACCTCAGGCTCGCAGGCCGCCACCGCGCTGTTGGCGCGCGAAGTCCAGGGCGTCGTCGGA
TTCTACGATCACACCATCGACCTGCAGGCCAAGGGCAAGTTCATCACCGACGTGGTGCAGTTCTCGGTCGCGCCCGGCGA
GGTCGTGCTGGTGAAGGCGGCCGAAGCTGACAAGCTGAAGCAGCCCGCGAACTGGAAGGGCTTGGCGCTCGGCGTGACCG
GCCTCGGCTCGGCCACCGACTTTCTCACCCGCGCGCTCGCCGCCAAGGCCGGCCTGAAGATGCAGGACTACACGCTGGTG
CCGGTCGGCGCCGGCGACACCTTCCTGGCGGCGATGCAGCAGGGCAAGATCAGCTCGGGCATGACCACCGAGCCGACCGT
GCAGCGCGCGCTGAGTTCAGGCACCGCCAAGATCGGCATCGACCTGCGCTCGCCGGAGCAGACCCGCAAGGCGCTCGGCG
GCGACTATCCGGCCGCTTGCCTGTACATGGACCGCGGCTGGATGGAGGCAAACAAGCCCACCGTGCAGAAGCTGGTGAAC
GCCTTCGTCAAGACGCTGAAATGGATCCAGGCGCATTCGGCCGAAGAGATCGCCGACAAGATGCCGAAGGATTACTACGC
CGGCGACCGCGCCCTCTACGTCCAAGGCCTGCAGGACGGCAAGGTGCAGTACTCGCCCGACGGCATGATGCCGGCCGGCG
CTCCGGAATCCGTCGCCAAGATCCTTGCCAGCTTCTCGCCCAACCTGCAGGGCAAGACGATCGATCTGGCCAAGACCTAC
ACGACGGAGTTCGTGGTGAAGGCGAATGCGGGCCAGTGA

Upstream 100 bases:

>100_bases
CGCGACCGGCATTGACAGATTGCCGCACCCCGGGTCCTGATGCGTGAGCCTTGTCGCGGCCCCTGCGGGCACGACAAGCG
AACGTCATGAGGAAACGCCG

Downstream 100 bases:

>100_bases
GTCTGCCCGGCAGCAGATCATGCGCCGCGTGATGGCCCGCGGCATGTTCGACTATGAGCGCTGTTGGAACATGAGGGGTC
CGCCCCGAGACGTGCCCCGC

Product: ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NMT1/THI5-Like Domain-Containing Protein; Signal Peptide Protein; Amino Acid ABC Transporter; NMT1/THI5 Like Domain-Containing Protein; Twin-Arginine Translocation Pathway Signal; Twin-Arginine Translocation Pathway Signal Protein; ABC Transporter Protein

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MRRVVAALFAVLLTAVPAAAQTPLKIMVGGIDKQIYLPAKLAAQLGFFKEEGLDVELFNSTSGSQAATALLAREVQGVVG
FYDHTIDLQAKGKFITDVVQFSVAPGEVVLVKAAEADKLKQPANWKGLALGVTGLGSATDFLTRALAAKAGLKMQDYTLV
PVGAGDTFLAAMQQGKISSGMTTEPTVQRALSSGTAKIGIDLRSPEQTRKALGGDYPAACLYMDRGWMEANKPTVQKLVN
AFVKTLKWIQAHSAEEIADKMPKDYYAGDRALYVQGLQDGKVQYSPDGMMPAGAPESVAKILASFSPNLQGKTIDLAKTY
TTEFVVKANAGQ

Sequences:

>Translated_332_residues
MRRVVAALFAVLLTAVPAAAQTPLKIMVGGIDKQIYLPAKLAAQLGFFKEEGLDVELFNSTSGSQAATALLAREVQGVVG
FYDHTIDLQAKGKFITDVVQFSVAPGEVVLVKAAEADKLKQPANWKGLALGVTGLGSATDFLTRALAAKAGLKMQDYTLV
PVGAGDTFLAAMQQGKISSGMTTEPTVQRALSSGTAKIGIDLRSPEQTRKALGGDYPAACLYMDRGWMEANKPTVQKLVN
AFVKTLKWIQAHSAEEIADKMPKDYYAGDRALYVQGLQDGKVQYSPDGMMPAGAPESVAKILASFSPNLQGKTIDLAKTY
TTEFVVKANAGQ
>Mature_332_residues
MRRVVAALFAVLLTAVPAAAQTPLKIMVGGIDKQIYLPAKLAAQLGFFKEEGLDVELFNSTSGSQAATALLAREVQGVVG
FYDHTIDLQAKGKFITDVVQFSVAPGEVVLVKAAEADKLKQPANWKGLALGVTGLGSATDFLTRALAAKAGLKMQDYTLV
PVGAGDTFLAAMQQGKISSGMTTEPTVQRALSSGTAKIGIDLRSPEQTRKALGGDYPAACLYMDRGWMEANKPTVQKLVN
AFVKTLKWIQAHSAEEIADKMPKDYYAGDRALYVQGLQDGKVQYSPDGMMPAGAPESVAKILASFSPNLQGKTIDLAKTY
TTEFVVKANAGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35279; Mature: 35279

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVVAALFAVLLTAVPAAAQTPLKIMVGGIDKQIYLPAKLAAQLGFFKEEGLDVELFNS
CHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEHHHHHHHHCCHHHCCCCEEEECC
TSGSQAATALLAREVQGVVGFYDHTIDLQAKGKFITDVVQFSVAPGEVVLVKAAEADKLK
CCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCCCCEEEEEECCHHHCC
QPANWKGLALGVTGLGSATDFLTRALAAKAGLKMQDYTLVPVGAGDTFLAAMQQGKISSG
CCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCCCCCC
MTTEPTVQRALSSGTAKIGIDLRSPEQTRKALGGDYPAACLYMDRGWMEANKPTVQKLVN
CCCCHHHHHHHHCCCEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHH
AFVKTLKWIQAHSAEEIADKMPKDYYAGDRALYVQGLQDGKVQYSPDGMMPAGAPESVAK
HHHHHHHHHHHCCHHHHHHHCCHHHCCCCEEEEEECCCCCCEEECCCCCCCCCCHHHHHH
ILASFSPNLQGKTIDLAKTYTTEFVVKANAGQ
HHHHCCCCCCCCEEEEEEEECEEEEEEECCCC
>Mature Secondary Structure
MRRVVAALFAVLLTAVPAAAQTPLKIMVGGIDKQIYLPAKLAAQLGFFKEEGLDVELFNS
CHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEHHHHHHHHCCHHHCCCCEEEECC
TSGSQAATALLAREVQGVVGFYDHTIDLQAKGKFITDVVQFSVAPGEVVLVKAAEADKLK
CCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCCCCEEEEEECCHHHCC
QPANWKGLALGVTGLGSATDFLTRALAAKAGLKMQDYTLVPVGAGDTFLAAMQQGKISSG
CCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCCCCCC
MTTEPTVQRALSSGTAKIGIDLRSPEQTRKALGGDYPAACLYMDRGWMEANKPTVQKLVN
CCCCHHHHHHHHCCCEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHH
AFVKTLKWIQAHSAEEIADKMPKDYYAGDRALYVQGLQDGKVQYSPDGMMPAGAPESVAK
HHHHHHHHHHHCCHHHHHHHCCHHHCCCCEEEEEECCCCCCEEECCCCCCCCCCHHHHHH
ILASFSPNLQGKTIDLAKTYTTEFVVKANAGQ
HHHHCCCCCCCCEEEEEEEECEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA