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The map label for this gene is atpF

Identifier: 192289339

GI number: 192289339

Start: 968895

End: 969386

Strand: Reverse

Name: atpF

Synonym: Rpal_0911

Alternate gene names: 192289339

Gene position: 969386-968895 (Counterclockwise)

Preceding gene: 192289340

Following gene: 192289326

Centisome position: 16.88

GC content: 66.26

Gene sequence:

>492_bases
ATGGCAATCTTCGGAGAAGCAGAAACCTGGGTCGCGATTGCGTTCGTCATTCTGCTCGGCGTGTTCGCCTATCTGGGCGT
TCACCGCACCGTGTTGCAGGCGCTGGACAAGCGTCGCGACAGGATCAAGGCGGAGCTCGACGAAGCGCGCAAGCTGAAGG
ACGAGGCCGCCAAGTTGCTCGCCGACTACCGGGCGCGCCGCGCCTCGGCCGAACGCGAAGCGCAGGCGATCGTCGACAGC
GCGAAGGCCGATGCCGAACGGATCGCGGCGGAAGCCAAGGCCAAGCTGGAAGATTTCGTCGCTCGCCGCACCAAGACCGC
GGAAAGCAAGATCGCCCTCGCCGAAGCCCAGGCACTCGCCGACGTCCGCGCGGCGGCTGCTGAAGCTGCGGTGGCGGCGG
CCTCGCGGATCCTGTCGGAATCGGTCAAGGGCAACCTCGCCGACGAGCTGCTCAGCAAGGGCATCCAGGAAGTCCGCGGC
AAGCTCAACTGA

Upstream 100 bases:

>100_bases
CGGACGCCGCTTCGGCGATTGTCCAGCAGCTCGCCGGCGTCACGCCGGACAGCAAGGCGGTGGACAGCGCGGTTGACGCT
TCGTTGAAGGGCTGAGGCTG

Downstream 100 bases:

>100_bases
GCTGACGCCTGTTACAAATCAAAGGCCGGCGCGAGCGATCGCGCCGGCCTTTTTGTTTTGTTTACCGCGTGAGGTGCTGC
CGCCCCCGTGCTGGCGGGAC

Product: H+transporting two-sector ATPase B/B' subunit

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MAIFGEAETWVAIAFVILLGVFAYLGVHRTVLQALDKRRDRIKAELDEARKLKDEAAKLLADYRARRASAEREAQAIVDS
AKADAERIAAEAKAKLEDFVARRTKTAESKIALAEAQALADVRAAAAEAAVAAASRILSESVKGNLADELLSKGIQEVRG
KLN

Sequences:

>Translated_163_residues
MAIFGEAETWVAIAFVILLGVFAYLGVHRTVLQALDKRRDRIKAELDEARKLKDEAAKLLADYRARRASAEREAQAIVDS
AKADAERIAAEAKAKLEDFVARRTKTAESKIALAEAQALADVRAAAAEAAVAAASRILSESVKGNLADELLSKGIQEVRG
KLN
>Mature_162_residues
AIFGEAETWVAIAFVILLGVFAYLGVHRTVLQALDKRRDRIKAELDEARKLKDEAAKLLADYRARRASAEREAQAIVDSA
KADAERIAAEAKAKLEDFVARRTKTAESKIALAEAQALADVRAAAAEAAVAAASRILSESVKGNLADELLSKGIQEVRGK
LN

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_RHOPA (Q6NBI5)

Other databases:

- EMBL:   BX572595
- RefSeq:   NP_946196.1
- GeneID:   2690885
- GenomeReviews:   BX571963_GR
- KEGG:   rpa:RPA0843
- NMPDR:   fig|258594.1.peg.840
- HOGENOM:   HBG692690
- OMA:   KTEEFVA
- ProtClustDB:   CLSK818463
- BioCyc:   RPAL258594:RPA0843-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 17586; Mature: 17455

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1ca6f93c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIFGEAETWVAIAFVILLGVFAYLGVHRTVLQALDKRRDRIKAELDEARKLKDEAAKLL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADYRARRASAEREAQAIVDSAKADAERIAAEAKAKLEDFVARRTKTAESKIALAEAQALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVRAAAAEAAVAAASRILSESVKGNLADELLSKGIQEVRGKLN
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure 
AIFGEAETWVAIAFVILLGVFAYLGVHRTVLQALDKRRDRIKAELDEARKLKDEAAKLL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADYRARRASAEREAQAIVDSAKADAERIAAEAKAKLEDFVARRTKTAESKIALAEAQALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVRAAAAEAAVAAASRILSESVKGNLADELLSKGIQEVRGKLN
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA