| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is cysW [H]
Identifier: 192289247
GI number: 192289247
Start: 863372
End: 864286
Strand: Reverse
Name: cysW [H]
Synonym: Rpal_0819
Alternate gene names: 192289247
Gene position: 864286-863372 (Counterclockwise)
Preceding gene: 192289248
Following gene: 192289246
Centisome position: 15.05
GC content: 64.26
Gene sequence:
>915_bases ATGACGATGGTTGCCACCAGTCAAGTCAGGCGTGCAGCGATCGCATCTGCCGGCGCCGCCGCACCAGCCGCCGCCGGGCG CCGTTCCGCCCACACCGAGCCGGCTTGGGTGCGGCTGCTGATCATCGGATCCGCTCTCACCTTCCTCACCGTGTTCGTAG TGCTGCCGCTGATCCTGGTGTTTTCCGAGGCCCTGGCGAAGGGCGCAGCGTTCTATCTGTCGGCGCTGGCCGACAACGAA GCGCTTGCGGCGATCAAGCTGACGCTGATTGCGGCCGGCATTTCGGTCGGCCTCAATCTGGTATTCGGTGTCATCGCCGC CTGGGCGATTGCGAAATTCGACTTTCCGGGCAAGACGTTCCTAATCACGCTGATCGATCTACCGTTCTCGGTCTCTCCCG TGATCTCGGGCCTCGTGTTCGTGCTGCTGTTCGGCGCGCAAGGCTGGTTCGGGCCGTGGCTGATGGCGCACGGCGTCCAG ATCCTGTTCGCGGTGCCGGCGATTGTGCTGGCGACGACCTTCGTCACCTTCCCGTTCGTGGCGCGCGAACTGATCCCGCT GATGCAGGAGCAGGGCCAGCAGGAAGAGGAAGCCGCGATCTCGCTCGGCGCCAGTGGCTGGACCACGTTCTGGCGGGTCA CGATGCCGAACATCAAATGGGGCCTGCTGTACGGCGTACTGCTGTGCAACGCCCGCGCGATGGGCGAATTCGGCGCGGTG TCGGTGGTGTCGGGCCATATCCGCGGCGAGACCAACACCATGCCGCTGCTGGTGGAAATTCTGTACAACGAGTACCAGAT GGTGGCCGCATTCGCGATCGCCTCGCTGCTGGCGCTGCTCGCGCTGGTGACGCTGATCGCTAAGACCGTGCTGGAAGGCC GCATCGAAGAGGGGCTGCATCCCGATGACCATTGA
Upstream 100 bases:
>100_bases ATCGCGGTGGTGATGCTGATCTTCTCGTTCCTGATCATCTTCGTCCTCAATCGGATCCAGCACTGGGCGCAATCCCGGTC GCTGGCCACGGCGTGACGCC
Downstream 100 bases:
>100_bases AGTCCGCAACATCGTCAAGGAATTCGGCAGCTTCCGAGCACTCGACAATGTCGATCTGCGGGTCGAGACCGGCGAACTGA TGGCGCTGCTCGGTCCGTCC
Product: sulfate ABC transporter inner membrane subunit CysW
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MTMVATSQVRRAAIASAGAAAPAAAGRRSAHTEPAWVRLLIIGSALTFLTVFVVLPLILVFSEALAKGAAFYLSALADNE ALAAIKLTLIAAGISVGLNLVFGVIAAWAIAKFDFPGKTFLITLIDLPFSVSPVISGLVFVLLFGAQGWFGPWLMAHGVQ ILFAVPAIVLATTFVTFPFVARELIPLMQEQGQQEEEAAISLGASGWTTFWRVTMPNIKWGLLYGVLLCNARAMGEFGAV SVVSGHIRGETNTMPLLVEILYNEYQMVAAFAIASLLALLALVTLIAKTVLEGRIEEGLHPDDH
Sequences:
>Translated_304_residues MTMVATSQVRRAAIASAGAAAPAAAGRRSAHTEPAWVRLLIIGSALTFLTVFVVLPLILVFSEALAKGAAFYLSALADNE ALAAIKLTLIAAGISVGLNLVFGVIAAWAIAKFDFPGKTFLITLIDLPFSVSPVISGLVFVLLFGAQGWFGPWLMAHGVQ ILFAVPAIVLATTFVTFPFVARELIPLMQEQGQQEEEAAISLGASGWTTFWRVTMPNIKWGLLYGVLLCNARAMGEFGAV SVVSGHIRGETNTMPLLVEILYNEYQMVAAFAIASLLALLALVTLIAKTVLEGRIEEGLHPDDH >Mature_303_residues TMVATSQVRRAAIASAGAAAPAAAGRRSAHTEPAWVRLLIIGSALTFLTVFVVLPLILVFSEALAKGAAFYLSALADNEA LAAIKLTLIAAGISVGLNLVFGVIAAWAIAKFDFPGKTFLITLIDLPFSVSPVISGLVFVLLFGAQGWFGPWLMAHGVQI LFAVPAIVLATTFVTFPFVARELIPLMQEQGQQEEEAAISLGASGWTTFWRVTMPNIKWGLLYGVLLCNARAMGEFGAVS VVSGHIRGETNTMPLLVEILYNEYQMVAAFAIASLLALLALVTLIAKTVLEGRIEEGLHPDDH
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=271, Percent_Identity=50.5535055350554, Blast_Score=277, Evalue=6e-76, Organism=Escherichia coli, GI1788764, Length=223, Percent_Identity=34.9775784753363, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI1786980, Length=181, Percent_Identity=33.1491712707182, Blast_Score=82, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32350; Mature: 32218
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMVATSQVRRAAIASAGAAAPAAAGRRSAHTEPAWVRLLIIGSALTFLTVFVVLPLILV CCCCCHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FSEALAKGAAFYLSALADNEALAAIKLTLIAAGISVGLNLVFGVIAAWAIAKFDFPGKTF HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE LITLIDLPFSVSPVISGLVFVLLFGAQGWFGPWLMAHGVQILFAVPAIVLATTFVTFPFV EEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARELIPLMQEQGQQEEEAAISLGASGWTTFWRVTMPNIKWGLLYGVLLCNARAMGEFGAV HHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCCHHCCCCCCH SVVSGHIRGETNTMPLLVEILYNEYQMVAAFAIASLLALLALVTLIAKTVLEGRIEEGLH HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PDDH CCCC >Mature Secondary Structure TMVATSQVRRAAIASAGAAAPAAAGRRSAHTEPAWVRLLIIGSALTFLTVFVVLPLILV CCCCHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FSEALAKGAAFYLSALADNEALAAIKLTLIAAGISVGLNLVFGVIAAWAIAKFDFPGKTF HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE LITLIDLPFSVSPVISGLVFVLLFGAQGWFGPWLMAHGVQILFAVPAIVLATTFVTFPFV EEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARELIPLMQEQGQQEEEAAISLGASGWTTFWRVTMPNIKWGLLYGVLLCNARAMGEFGAV HHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCCHHCCCCCCH SVVSGHIRGETNTMPLLVEILYNEYQMVAAFAIASLLALLALVTLIAKTVLEGRIEEGLH HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PDDH CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]