| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289203
Identifier: 192289203
GI number: 192289203
Start: 813501
End: 814244
Strand: Reverse
Name: 192289203
Synonym: Rpal_0774
Alternate gene names: NA
Gene position: 814244-813501 (Counterclockwise)
Preceding gene: 192289205
Following gene: 192289201
Centisome position: 14.18
GC content: 51.34
Gene sequence:
>744_bases ATGGATGAAATTGATTGGAGCCAAATGCGTGGGCTTGCTGACGAAGCGCACTGGAATCAGTTCGTGCCCACCTCAGGTGG TGAGTTGGTCGCAACCAAAATTAGGCGTCCAGGCGTGCAAAACGCCGACTACATGTTTCCGGTCGAGAAGGTGATATTGG AACACAAATTCATTCAAACGGAGTTCACTCACAATAAAGCGTTTCGAGCGAGATTCGAGGCGATATTGCAGAAGCATCCC GAGACCAACCCCCTCGACGAGCGCCTTCCGCTCAATCGCGAACTCGTCTTACTACTCACCAAGCCGATTCAGCGAATTCT CAATAAAGCAAACGGCCAGATAAAGGGGACCAAGACCGAATTACGTCTGCCAGACTGGAGCGGCGTCGTTCTATTTGTGA ACGATGGACTTCGCGACGTGCGGCCGGAACTGGTCGTAGGGGTGATCTCACACGTTTTGGCAAGCCAGCAATTTAGCGGA ATCGATGCGCTCATCTATCTCACGAATCACTATGTGGACCTTCCGGACACGCCCGACGCAAAGATCTATTGGCACCCCTT GTATTCGCCGACTTCCACGAACTCGTTGGCCGAATTCGTGAACAGTTTAGGCAGAAAATGGTTTGAATTTGCTCGTCAGC ATGGAGCGCTTATGGACTCTTACGACGTTCGGGATCAAGTAGACTTGAGTGAGATGTCGGTCATCGCAGGACCGACCCGA AATACGCGATATATTGGGGAATGA
Upstream 100 bases:
>100_bases CTGAGGTCAATGCGCCCCCTATTTGCCAGAATTGTAGGCGCATCGCGTCGATAGATAACTGTTCGGACACATCTCGAGTC GGTGAGCTGAGGTGAATTCT
Downstream 100 bases:
>100_bases TCCGGCGAGTTACGCAAAATTAGACGAACAAATGTCTTCCGAAACATTCTTAGATCGCATCGTTGGCGAAGTGCAATGAC AGCACGATCTGCGCGATGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MDEIDWSQMRGLADEAHWNQFVPTSGGELVATKIRRPGVQNADYMFPVEKVILEHKFIQTEFTHNKAFRARFEAILQKHP ETNPLDERLPLNRELVLLLTKPIQRILNKANGQIKGTKTELRLPDWSGVVLFVNDGLRDVRPELVVGVISHVLASQQFSG IDALIYLTNHYVDLPDTPDAKIYWHPLYSPTSTNSLAEFVNSLGRKWFEFARQHGALMDSYDVRDQVDLSEMSVIAGPTR NTRYIGE
Sequences:
>Translated_247_residues MDEIDWSQMRGLADEAHWNQFVPTSGGELVATKIRRPGVQNADYMFPVEKVILEHKFIQTEFTHNKAFRARFEAILQKHP ETNPLDERLPLNRELVLLLTKPIQRILNKANGQIKGTKTELRLPDWSGVVLFVNDGLRDVRPELVVGVISHVLASQQFSG IDALIYLTNHYVDLPDTPDAKIYWHPLYSPTSTNSLAEFVNSLGRKWFEFARQHGALMDSYDVRDQVDLSEMSVIAGPTR NTRYIGE >Mature_247_residues MDEIDWSQMRGLADEAHWNQFVPTSGGELVATKIRRPGVQNADYMFPVEKVILEHKFIQTEFTHNKAFRARFEAILQKHP ETNPLDERLPLNRELVLLLTKPIQRILNKANGQIKGTKTELRLPDWSGVVLFVNDGLRDVRPELVVGVISHVLASQQFSG IDALIYLTNHYVDLPDTPDAKIYWHPLYSPTSTNSLAEFVNSLGRKWFEFARQHGALMDSYDVRDQVDLSEMSVIAGPTR NTRYIGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28240; Mature: 28240
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEIDWSQMRGLADEAHWNQFVPTSGGELVATKIRRPGVQNADYMFPVEKVILEHKFIQT CCCCCHHHHHCCHHHHHCCCCCCCCCCCEEEEHHCCCCCCCCCCCCHHHHHHHHHHHHHH EFTHNKAFRARFEAILQKHPETNPLDERLPLNRELVLLLTKPIQRILNKANGQIKGTKTE HHHCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEHHHHHHHHHHHHHCCCCEECCEEE LRLPDWSGVVLFVNDGLRDVRPELVVGVISHVLASQQFSGIDALIYLTNHYVDLPDTPDA EECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEECCCCCCCC KIYWHPLYSPTSTNSLAEFVNSLGRKWFEFARQHGALMDSYDVRDQVDLSEMSVIAGPTR EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHEEECCCC NTRYIGE CCCCCCC >Mature Secondary Structure MDEIDWSQMRGLADEAHWNQFVPTSGGELVATKIRRPGVQNADYMFPVEKVILEHKFIQT CCCCCHHHHHCCHHHHHCCCCCCCCCCCEEEEHHCCCCCCCCCCCCHHHHHHHHHHHHHH EFTHNKAFRARFEAILQKHPETNPLDERLPLNRELVLLLTKPIQRILNKANGQIKGTKTE HHHCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEHHHHHHHHHHHHHCCCCEECCEEE LRLPDWSGVVLFVNDGLRDVRPELVVGVISHVLASQQFSGIDALIYLTNHYVDLPDTPDA EECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEECCCCCCCC KIYWHPLYSPTSTNSLAEFVNSLGRKWFEFARQHGALMDSYDVRDQVDLSEMSVIAGPTR EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHEEECCCC NTRYIGE CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA