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The map label for this gene is 192288931

Identifier: 192288931

GI number: 192288931

Start: 544795

End: 545439

Strand: Reverse

Name: 192288931

Synonym: Rpal_0501

Alternate gene names: NA

Gene position: 545439-544795 (Counterclockwise)

Preceding gene: 192288933

Following gene: 192288929

Centisome position: 9.5

GC content: 64.65

Gene sequence:

>645_bases
ATGCCAATCGACTCATCCAAATTCTTCGACAAGATCCGCGTCAAGCCGCGAGCCGCCGAAGCGGCGCGCGAGGCCGTGCG
CGAGCAGGTGCGGATGTGCGACGCCCCGGGCTGCACCAGCCGCGCCGCACACCGCGCGCCCAAGGGCCGCGGGTATGAGA
AGGATTACTGGCACTTCTGTCTCAATCACGTCCGCGAATTCAACCAGGGTTATAACTTCTTCGAAGGGATGAATCCGGAT
GACGTCGCCCGCTATCAGAAAGACGCGCTGACAGGTCATCGCCCGACCTGGAAGATGGGGCAGAACGGCGCCAAAAGCCG
CGCCCGCAGCCCCGAGGATCTCGAAGGCGCCGCCGATCCGTTCAACGTCTTCAACGAATTCACCGGCAGCCGCCGGCGGC
GTCGCGGGCCCGATCCGGCCGACGAGGCGCGCGCTGAGCCGCGCAAGGTGTTCAACGCCGAGCGCAAGGCGCTGCAGGTG
ATGGGCCTCGACAGCGACGCCACGCTCGAAGTGGTCAAGGCCAAGTACAAGGCGCTGGTGAAGCAGCATCACCCCGACGC
CAACGGCGGCGACCGCTCGACCGAAGACCGCCTGATCGAGATCATCAAGGCGTACAACTATCTGAAGACGGTGGTGCGGA
GCTAA

Upstream 100 bases:

>100_bases
GCCGTTATTCCGTCAAACCTGTCTGCGACGCAATCAACCCGGGGGCTGCTTGGAATGTCAAGACTTGAAGCCCGAAGCGT
TGCGTAGTCAAAGTCCGTCC

Downstream 100 bases:

>100_bases
CCGCTCTGGGCGGCACCTGCCGGTCGCTGGCGTATAACGCTTGCGTCGTTGAGCTTGATTGAAGCTAGGCCGGCGTGCCC
CTCCAACGCCGATACGCCCA

Product: heat shock protein DnaJ domain-containing protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MPIDSSKFFDKIRVKPRAAEAAREAVREQVRMCDAPGCTSRAAHRAPKGRGYEKDYWHFCLNHVREFNQGYNFFEGMNPD
DVARYQKDALTGHRPTWKMGQNGAKSRARSPEDLEGAADPFNVFNEFTGSRRRRRGPDPADEARAEPRKVFNAERKALQV
MGLDSDATLEVVKAKYKALVKQHHPDANGGDRSTEDRLIEIIKAYNYLKTVVRS

Sequences:

>Translated_214_residues
MPIDSSKFFDKIRVKPRAAEAAREAVREQVRMCDAPGCTSRAAHRAPKGRGYEKDYWHFCLNHVREFNQGYNFFEGMNPD
DVARYQKDALTGHRPTWKMGQNGAKSRARSPEDLEGAADPFNVFNEFTGSRRRRRGPDPADEARAEPRKVFNAERKALQV
MGLDSDATLEVVKAKYKALVKQHHPDANGGDRSTEDRLIEIIKAYNYLKTVVRS
>Mature_213_residues
PIDSSKFFDKIRVKPRAAEAAREAVREQVRMCDAPGCTSRAAHRAPKGRGYEKDYWHFCLNHVREFNQGYNFFEGMNPDD
VARYQKDALTGHRPTWKMGQNGAKSRARSPEDLEGAADPFNVFNEFTGSRRRRRGPDPADEARAEPRKVFNAERKALQVM
GLDSDATLEVVKAKYKALVKQHHPDANGGDRSTEDRLIEIIKAYNYLKTVVRS

Specific function: Unknown

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001623
- InterPro:   IPR015609
- InterPro:   IPR003095 [H]

Pfam domain/function: PF00226 DnaJ [H]

EC number: NA

Molecular weight: Translated: 24386; Mature: 24254

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIDSSKFFDKIRVKPRAAEAAREAVREQVRMCDAPGCTSRAAHRAPKGRGYEKDYWHFC
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHH
LNHVREFNQGYNFFEGMNPDDVARYQKDALTGHRPTWKMGQNGAKSRARSPEDLEGAADP
HHHHHHHHHCCHHHCCCCHHHHHHHHHHHHCCCCCCHHCCCCCHHHHCCCCHHHCCCCCH
FNVFNEFTGSRRRRRGPDPADEARAEPRKVFNAERKALQVMGLDSDATLEVVKAKYKALV
HHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
KQHHPDANGGDRSTEDRLIEIIKAYNYLKTVVRS
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PIDSSKFFDKIRVKPRAAEAAREAVREQVRMCDAPGCTSRAAHRAPKGRGYEKDYWHFC
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHH
LNHVREFNQGYNFFEGMNPDDVARYQKDALTGHRPTWKMGQNGAKSRARSPEDLEGAADP
HHHHHHHHHCCHHHCCCCHHHHHHHHHHHHCCCCCCHHCCCCCHHHHCCCCHHHCCCCCH
FNVFNEFTGSRRRRRGPDPADEARAEPRKVFNAERKALQVMGLDSDATLEVVKAKYKALV
HHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
KQHHPDANGGDRSTEDRLIEIIKAYNYLKTVVRS
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1917840 [H]