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The map label for this gene is 192288916

Identifier: 192288916

GI number: 192288916

Start: 524648

End: 525853

Strand: Reverse

Name: 192288916

Synonym: Rpal_0486

Alternate gene names: NA

Gene position: 525853-524648 (Counterclockwise)

Preceding gene: 192288919

Following gene: 192288915

Centisome position: 9.15

GC content: 63.18

Gene sequence:

>1206_bases
TTGAAGCCGTTCCGCACCACTTTGCTCGCATGTCTATCGATCGCGGCGATCACCGCCGCGCAGGCGCAATCGCAGCCACC
GCTGAAGCTCGGCGCGATCCTCGACATGTCGGGCCTCTACGCCGACATCACCGGAACGGGCAGCGAGACCGCGGCCAAGA
TGGCGGTGGAGGATTTCGGCGGCACGGTGCTGGGGCGCAAGGTCGAGATCATCGCCGCCGACCATCTCAACAAGGCAGAT
CTGTCCGCCAACATCGCCCGCGACATGCTCGACAATCAGGGCGTCGAAGCGATCATCGACGTCGCGGCCTCGGCAACCGC
GCTGGCCGCCGCCGAGATCGCCAAGGCCCGCAACAAGATCATCATGTTCTCCGGTCCGGGCTCGATCCGGCTCAGCAACG
AAGCCTGCGGCCCCTATACCGTGCACTACGTGTTCGACACCTTCGCGCAAGCCAACACCACCGGCCTTGCCGCGGTGAAG
CAAGGGCTCGACACCTGGTTCTTCCTGTCGGCCGACTATGCGTTCGGCCAAGACCTCGAGCGCGACACCACCAATGTCAT
CAAGGCGTCGGGCGGCAAGGTGCTGGGCAGCGTCAAGCATCCGCTCAACACCTCCGACTTCTCCTCGTTCCTGCTGCAGG
CGCAAAGCTCGAAGGCCAAGGTGATCGGCCTCGCCAACGCCGGCGGCGACACCATCAACGCGATCAAGCAGGGCGCCGAA
TTCGGCATCACCAAAGGCGGCCAGAAGATCTCGCCGCTGCTTGCCTTCATCTCCGACATCGACAGCGTCGGGCTGGAAAC
CGCACAGGGTCTGATCCTGGCCGAAGCGTTCTATTGGGATCTCAACGACGAGACCCGCGCGTTCTCCAAGCGGTTCATGG
AGCGCACCAAGCGGATGCCGACCTCGGCGCAGGCGGGCCTGTACTCCGAAACGATGCACTACCTACAGGCGGTCAAGGCG
GCCGGCACCACCGATGCGGCCGCGGTGACCAAGAAGATGAAGGAAATGCCGATCAACGACTTCTTCGCCAAGAACGGCAA
GATCCGTGAGGATGGCCGGATGGTGCACGACATGTACCTGTTCGAGGTCAAGAAGCCATCGGAGTCGAAGGGCCGCTGGG
ACTATTACAAGCTGCTCGCGACCGTTCCTGGCGATCAGGCATTCCAGTCGCTCGCCGACTCGCGCTGCCCGCTGGTGAAG
AAGTAA

Upstream 100 bases:

>100_bases
GGAAAACCGCATCGCTTGCCGCGCAGCAAGCGATGCGGCATGATCGCGCCAATCATCAGAAGCGCCGCGATCATGATCGG
CGCTCGCCAGGGAGGATGTC

Downstream 100 bases:

>100_bases
CTACCCGTCATTGCGAGGAGGCGAAGCCGACGAGGCAATCCAGCTCGGTGCACCAAGCTGGATTGCTTCGCCTTCGCCTC
GCAACGACAGAACGCTCATG

Product: substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MKPFRTTLLACLSIAAITAAQAQSQPPLKLGAILDMSGLYADITGTGSETAAKMAVEDFGGTVLGRKVEIIAADHLNKAD
LSANIARDMLDNQGVEAIIDVAASATALAAAEIAKARNKIIMFSGPGSIRLSNEACGPYTVHYVFDTFAQANTTGLAAVK
QGLDTWFFLSADYAFGQDLERDTTNVIKASGGKVLGSVKHPLNTSDFSSFLLQAQSSKAKVIGLANAGGDTINAIKQGAE
FGITKGGQKISPLLAFISDIDSVGLETAQGLILAEAFYWDLNDETRAFSKRFMERTKRMPTSAQAGLYSETMHYLQAVKA
AGTTDAAAVTKKMKEMPINDFFAKNGKIREDGRMVHDMYLFEVKKPSESKGRWDYYKLLATVPGDQAFQSLADSRCPLVK
K

Sequences:

>Translated_401_residues
MKPFRTTLLACLSIAAITAAQAQSQPPLKLGAILDMSGLYADITGTGSETAAKMAVEDFGGTVLGRKVEIIAADHLNKAD
LSANIARDMLDNQGVEAIIDVAASATALAAAEIAKARNKIIMFSGPGSIRLSNEACGPYTVHYVFDTFAQANTTGLAAVK
QGLDTWFFLSADYAFGQDLERDTTNVIKASGGKVLGSVKHPLNTSDFSSFLLQAQSSKAKVIGLANAGGDTINAIKQGAE
FGITKGGQKISPLLAFISDIDSVGLETAQGLILAEAFYWDLNDETRAFSKRFMERTKRMPTSAQAGLYSETMHYLQAVKA
AGTTDAAAVTKKMKEMPINDFFAKNGKIREDGRMVHDMYLFEVKKPSESKGRWDYYKLLATVPGDQAFQSLADSRCPLVK
K
>Mature_401_residues
MKPFRTTLLACLSIAAITAAQAQSQPPLKLGAILDMSGLYADITGTGSETAAKMAVEDFGGTVLGRKVEIIAADHLNKAD
LSANIARDMLDNQGVEAIIDVAASATALAAAEIAKARNKIIMFSGPGSIRLSNEACGPYTVHYVFDTFAQANTTGLAAVK
QGLDTWFFLSADYAFGQDLERDTTNVIKASGGKVLGSVKHPLNTSDFSSFLLQAQSSKAKVIGLANAGGDTINAIKQGAE
FGITKGGQKISPLLAFISDIDSVGLETAQGLILAEAFYWDLNDETRAFSKRFMERTKRMPTSAQAGLYSETMHYLQAVKA
AGTTDAAAVTKKMKEMPINDFFAKNGKIREDGRMVHDMYLFEVKKPSESKGRWDYYKLLATVPGDQAFQSLADSRCPLVK
K

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 43011; Mature: 43011

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPFRTTLLACLSIAAITAAQAQSQPPLKLGAILDMSGLYADITGTGSETAAKMAVEDFG
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHEEECCCCEEEECCCCCHHHHHHHHHHHC
GTVLGRKVEIIAADHLNKADLSANIARDMLDNQGVEAIIDVAASATALAAAEIAKARNKI
CEEECCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCE
IMFSGPGSIRLSNEACGPYTVHYVFDTFAQANTTGLAAVKQGLDTWFFLSADYAFGQDLE
EEEECCCCEEECCCCCCCEEEHHHHHHHHHCCCHHHHHHHHCCCEEEEEECCCHHCCCCC
RDTTNVIKASGGKVLGSVKHPLNTSDFSSFLLQAQSSKAKVIGLANAGGDTINAIKQGAE
HHHHHHEECCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCHH
FGITKGGQKISPLLAFISDIDSVGLETAQGLILAEAFYWDLNDETRAFSKRFMERTKRMP
CCCCCCCCHHHHHHHHHHHHHHHCHHHHCCEEEEEEEEECCCCHHHHHHHHHHHHHHCCC
TSAQAGLYSETMHYLQAVKAAGTTDAAAVTKKMKEMPINDFFAKNGKIREDGRMVHDMYL
CCHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEEEEE
FEVKKPSESKGRWDYYKLLATVPGDQAFQSLADSRCPLVKK
EEECCCCCCCCCHHHHHHEEECCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKPFRTTLLACLSIAAITAAQAQSQPPLKLGAILDMSGLYADITGTGSETAAKMAVEDFG
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHEEECCCCEEEECCCCCHHHHHHHHHHHC
GTVLGRKVEIIAADHLNKADLSANIARDMLDNQGVEAIIDVAASATALAAAEIAKARNKI
CEEECCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCE
IMFSGPGSIRLSNEACGPYTVHYVFDTFAQANTTGLAAVKQGLDTWFFLSADYAFGQDLE
EEEECCCCEEECCCCCCCEEEHHHHHHHHHCCCHHHHHHHHCCCEEEEEECCCHHCCCCC
RDTTNVIKASGGKVLGSVKHPLNTSDFSSFLLQAQSSKAKVIGLANAGGDTINAIKQGAE
HHHHHHEECCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCHH
FGITKGGQKISPLLAFISDIDSVGLETAQGLILAEAFYWDLNDETRAFSKRFMERTKRMP
CCCCCCCCHHHHHHHHHHHHHHHCHHHHCCEEEEEEEEECCCCHHHHHHHHHHHHHHCCC
TSAQAGLYSETMHYLQAVKAAGTTDAAAVTKKMKEMPINDFFAKNGKIREDGRMVHDMYL
CCHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEEEEE
FEVKKPSESKGRWDYYKLLATVPGDQAFQSLADSRCPLVKK
EEECCCCCCCCCHHHHHHEEECCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA