Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192288914

Identifier: 192288914

GI number: 192288914

Start: 522919

End: 523683

Strand: Reverse

Name: 192288914

Synonym: Rpal_0484

Alternate gene names: NA

Gene position: 523683-522919 (Counterclockwise)

Preceding gene: 192288915

Following gene: 192288910

Centisome position: 9.12

GC content: 67.06

Gene sequence:

>765_bases
ATGGCGCCGTTCCTTCGCCTGCGCCAGATCTGCCTCGTCACTGAGCCGATCGAGCCCGCCGCCTCGCGCATTGCGACGAT
CATGGGACTCAACATCTGCTACCGCGATCCCCACGTCGGCAAATACGGCCTGGAGAATGTCCTGCTGCCGGTCGATGCGA
CGCTTCTGGAAATCGTGGCACCGACCCAGCCCGGCACCGCGGCCGGCCGTTTCCTGGAGAAGACCCAAGGCCGCGGCGGC
TACATGGCGATCTTCTGTTGCGACGATCCGGATGCCCGCGGCCGTCACGCCGCGAGCCTCGGGGTTCGTACCGCCAATGT
GATCGACCACGCCCCGTATCACGGCGTGCAGCTTCACCCGCGCGACTGCCGGGCTGCCTTCATCGAGCTCAACCACACCG
CAGGCAGCGACAACATCCGCGGCCCCTACCCACCGGCCGGCCCCGACTGGGCAAAGGCGATCCGCACCGACACCACCCAG
GCGCTGACCGCAGTCGAGATGCAAAGTCCCGACCCAGCCGATCTCGCCGCGCATTGGGGCCGGATTCTCGAACTACCGGT
CGAAACGGATGCAGATGGCGTCGCCGAACTCCGCCTGCCGAACGCCACGTTCCGGTTCGTGCAAGGCGCGAGCGAAGCAA
TGACGGCGCTGACGTTCAAAGTGACAGCTCCCGAGACGGTCCGCGCAGCCGCGCAGGCGCAGGGCGTGCCGCTCACCGCC
AACGGCTTCCGCCTGGCAGGCGTCGAGTTTAGGCTGACCACCTAA

Upstream 100 bases:

>100_bases
AGGCGCTACATCACTCGCGCTGCGCTGAGACTGCCGACCACAAGGAAGCCGCTGCCGCCTTCGTCGAGAAGCGCGCGCCG
GTGTTCCAGGGCCGCTGACG

Downstream 100 bases:

>100_bases
CCACGCGTCATTCTGGGGCGCTCGCATAGCGAGCGAACCCGGAATCTCTGACGTCCAGCGGACAGTAGCAACAATTTCGA
GATTCCGGGTTCGCGCTACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MAPFLRLRQICLVTEPIEPAASRIATIMGLNICYRDPHVGKYGLENVLLPVDATLLEIVAPTQPGTAAGRFLEKTQGRGG
YMAIFCCDDPDARGRHAASLGVRTANVIDHAPYHGVQLHPRDCRAAFIELNHTAGSDNIRGPYPPAGPDWAKAIRTDTTQ
ALTAVEMQSPDPADLAAHWGRILELPVETDADGVAELRLPNATFRFVQGASEAMTALTFKVTAPETVRAAAQAQGVPLTA
NGFRLAGVEFRLTT

Sequences:

>Translated_254_residues
MAPFLRLRQICLVTEPIEPAASRIATIMGLNICYRDPHVGKYGLENVLLPVDATLLEIVAPTQPGTAAGRFLEKTQGRGG
YMAIFCCDDPDARGRHAASLGVRTANVIDHAPYHGVQLHPRDCRAAFIELNHTAGSDNIRGPYPPAGPDWAKAIRTDTTQ
ALTAVEMQSPDPADLAAHWGRILELPVETDADGVAELRLPNATFRFVQGASEAMTALTFKVTAPETVRAAAQAQGVPLTA
NGFRLAGVEFRLTT
>Mature_253_residues
APFLRLRQICLVTEPIEPAASRIATIMGLNICYRDPHVGKYGLENVLLPVDATLLEIVAPTQPGTAAGRFLEKTQGRGGY
MAIFCCDDPDARGRHAASLGVRTANVIDHAPYHGVQLHPRDCRAAFIELNHTAGSDNIRGPYPPAGPDWAKAIRTDTTQA
LTAVEMQSPDPADLAAHWGRILELPVETDADGVAELRLPNATFRFVQGASEAMTALTFKVTAPETVRAAAQAQGVPLTAN
GFRLAGVEFRLTT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27274; Mature: 27143

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPFLRLRQICLVTEPIEPAASRIATIMGLNICYRDPHVGKYGLENVLLPVDATLLEIVA
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHCEEEECCCCCCCCCCCCEEECCCHHEEEEEC
PTQPGTAAGRFLEKTQGRGGYMAIFCCDDPDARGRHAASLGVRTANVIDHAPYHGVQLHP
CCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHCCEEHHHHHCCCCCCEEECC
RDCRAAFIELNHTAGSDNIRGPYPPAGPDWAKAIRTDTTQALTAVEMQSPDPADLAAHWG
CCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCHHHEEEEECCCCCHHHHHHHCC
RILELPVETDADGVAELRLPNATFRFVQGASEAMTALTFKVTAPETVRAAAQAQGVPLTA
CEEEECCCCCCCCEEEEECCCCHHHHHHCHHHHEEEEEEEEECCHHHHHHHHHCCCCEEC
NGFRLAGVEFRLTT
CCEEEEEEEEEECC
>Mature Secondary Structure 
APFLRLRQICLVTEPIEPAASRIATIMGLNICYRDPHVGKYGLENVLLPVDATLLEIVA
CHHHHHHHHHHCCCCCCHHHHHHHHHHHCEEEECCCCCCCCCCCCEEECCCHHEEEEEC
PTQPGTAAGRFLEKTQGRGGYMAIFCCDDPDARGRHAASLGVRTANVIDHAPYHGVQLHP
CCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHCCEEHHHHHCCCCCCEEECC
RDCRAAFIELNHTAGSDNIRGPYPPAGPDWAKAIRTDTTQALTAVEMQSPDPADLAAHWG
CCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCHHHEEEEECCCCCHHHHHHHCC
RILELPVETDADGVAELRLPNATFRFVQGASEAMTALTFKVTAPETVRAAAQAQGVPLTA
CEEEECCCCCCCCEEEEECCCCHHHHHHCHHHHEEEEEEEEECCHHHHHHHHHCCCCEEC
NGFRLAGVEFRLTT
CCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA