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The map label for this gene is 192288872

Identifier: 192288872

GI number: 192288872

Start: 475837

End: 476616

Strand: Reverse

Name: 192288872

Synonym: Rpal_0441

Alternate gene names: NA

Gene position: 476616-475837 (Counterclockwise)

Preceding gene: 192288873

Following gene: 192288871

Centisome position: 8.3

GC content: 65.9

Gene sequence:

>780_bases
ATGCTTGCTGCCGAAACCGGCGCAGATCTCGACGACGGACCGCGGGCCAAGACGCCCGCGACCGAACGGATGTGCGCGGT
CACGCGGCAGGTGCGGCCGACCGGAGAACTGATCCGGTTCGTGGTTGGTCCGGCCGGTGAGGCGGTGGCCGATCTGAAGC
GCAAGCTTCCAGGCCGCGGCCTGTGGGTCACGGCGTCTCGGGAGATGGTGACGCAGGCGGTTCGCCGCCGCGTCTTCGCC
AAAGGTTTCAGACGCGACGTCAAGGCGCCGGCGGATCTCGCCGATGCGATCGAGCGCCTGCTGGCGCGCTCGGCGCAGGA
TGCGCTGGCGATCGCCGCCAAGGCCGGCCAGGTGGTCTGCGGTTTCGGCAAGGTCGAAACCGCGCTGAAGAGCCGCGAAG
CCGTCGCGGTGATCCACGCCACCGACGGCGCCGCCGATGGAATCCGCAAGCTGGACGGGCTTTGTCGGCAAATCGACGAA
GATGCGACCGCGGGTCGCAAATTTCCTCGGATCGCCGCACTCAGCTCTGCAGAATTGGATTTGGCATTAGGGCGGTCAAA
TGTGATACATGCTGCCCTGCTTGCGGGCCCGGCCGGACAAACATTCCTGTCGCGCTGCCAGATCCTGGTCCGATACCGGC
TGGCGGACGACGGCAATGCCGATGCGGCCACGGCAGGAACGCCGATCGACACGCCGAAAGACGCTGCTGACCAAGACGCC
GCTGACGAAGTCCGTGCGAACGCGCACAACGTTGAGAGATTGGGACTACTGAATGGTTGA

Upstream 100 bases:

>100_bases
GAACCCGCGGACGAAGCGTCCGACGAGTCGGCGGACTGAACCGCCGATGCGTCGCGCCCCGAATCCGCGCAGCACGTGAG
ATGAAAGGCCTGCTGCCCCC

Downstream 100 bases:

>100_bases
TACGAAAACTCCTGGCGACAAGACTCTGACGATGCCGACCAAGACCTTGACGCTGAAGCCCCGCGTCGAGCAGGGCGTCG
TGCGCCAGAGCTTCAGCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MLAAETGADLDDGPRAKTPATERMCAVTRQVRPTGELIRFVVGPAGEAVADLKRKLPGRGLWVTASREMVTQAVRRRVFA
KGFRRDVKAPADLADAIERLLARSAQDALAIAAKAGQVVCGFGKVETALKSREAVAVIHATDGAADGIRKLDGLCRQIDE
DATAGRKFPRIAALSSAELDLALGRSNVIHAALLAGPAGQTFLSRCQILVRYRLADDGNADAATAGTPIDTPKDAADQDA
ADEVRANAHNVERLGLLNG

Sequences:

>Translated_259_residues
MLAAETGADLDDGPRAKTPATERMCAVTRQVRPTGELIRFVVGPAGEAVADLKRKLPGRGLWVTASREMVTQAVRRRVFA
KGFRRDVKAPADLADAIERLLARSAQDALAIAAKAGQVVCGFGKVETALKSREAVAVIHATDGAADGIRKLDGLCRQIDE
DATAGRKFPRIAALSSAELDLALGRSNVIHAALLAGPAGQTFLSRCQILVRYRLADDGNADAATAGTPIDTPKDAADQDA
ADEVRANAHNVERLGLLNG
>Mature_259_residues
MLAAETGADLDDGPRAKTPATERMCAVTRQVRPTGELIRFVVGPAGEAVADLKRKLPGRGLWVTASREMVTQAVRRRVFA
KGFRRDVKAPADLADAIERLLARSAQDALAIAAKAGQVVCGFGKVETALKSREAVAVIHATDGAADGIRKLDGLCRQIDE
DATAGRKFPRIAALSSAELDLALGRSNVIHAALLAGPAGQTFLSRCQILVRYRLADDGNADAATAGTPIDTPKDAADQDA
ADEVRANAHNVERLGLLNG

Specific function: Unknown

COG id: COG2740

COG function: function code K; Predicted nucleic-acid-binding protein implicated in transcription termination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27265; Mature: 27265

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAAETGADLDDGPRAKTPATERMCAVTRQVRPTGELIRFVVGPAGEAVADLKRKLPGRG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCCC
LWVTASREMVTQAVRRRVFAKGFRRDVKAPADLADAIERLLARSAQDALAIAAKAGQVVC
EEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCEEE
GFGKVETALKSREAVAVIHATDGAADGIRKLDGLCRQIDEDATAGRKFPRIAALSSAELD
CCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHH
LALGRSNVIHAALLAGPAGQTFLSRCQILVRYRLADDGNADAATAGTPIDTPKDAADQDA
EECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH
ADEVRANAHNVERLGLLNG
HHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLAAETGADLDDGPRAKTPATERMCAVTRQVRPTGELIRFVVGPAGEAVADLKRKLPGRG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCCC
LWVTASREMVTQAVRRRVFAKGFRRDVKAPADLADAIERLLARSAQDALAIAAKAGQVVC
EEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCEEE
GFGKVETALKSREAVAVIHATDGAADGIRKLDGLCRQIDEDATAGRKFPRIAALSSAELD
CCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHH
LALGRSNVIHAALLAGPAGQTFLSRCQILVRYRLADDGNADAATAGTPIDTPKDAADQDA
EECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH
ADEVRANAHNVERLGLLNG
HHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA