Click here to switch to the map view.

The map label for this gene is hslV [H]

Identifier: 192288741

GI number: 192288741

Start: 331758

End: 332327

Strand: Reverse

Name: hslV [H]

Synonym: Rpal_0310

Alternate gene names: 192288741

Gene position: 332327-331758 (Counterclockwise)

Preceding gene: 192288749

Following gene: 192288740

Centisome position: 5.79

GC content: 67.72

Gene sequence:

>570_bases
ATGGCACTTTACAGCTCTTCGGCAGACGCCGGCCCGCCGGTCTGGCACGGCACCACCATTCTGACCGTGCGCAAGGGCGG
CAAGGTCGTGATCGGCGGCGACGGCCAGGTCTCGATCGGCCAGACCGTGATCAAGGCCAACGCCAAGAAGGTCCGCAAGC
TCGGCAAGGGCGACGTGATCGGCGGCTTCGCCGGCGCCACCGCCGACGCCTTCACGCTGTTCGAGCGGCTCGAAGCCAAA
CTCGAGCAGTACCCCGGCCAGCTCACCCGGGCCGCCGTCGAACTCGCCAAGGACTGGCGCACCGACCGCTATTTGCGCCG
GCTGGAAGCGATGATGATCGTCGCCGACAAGGACGTGTCGCTGGTCCTGACCGGCACCGGCGACGTGCTCGAGCCGGAGG
CCGGCGTGATGGCAATCGGCTCCGGCGGCAATTATGCGCTGGCAGCCGCCCGGGCGCTGGCGGACACCGACCAGGATGCC
GAGACCATCGTCCGCAAGGCACTCGGCATCGCCGCCGAGATCTGCGTCTACACCAACGGCAATCTTACCCTCGAGACGCT
GACCGCATGA

Upstream 100 bases:

>100_bases
TCGTCCTATGGTGAGCGGATTGGCCGCTTCGGCGGTGGTCGGGAGGGCGATTGCATCGCCGCCCGGCCGTGCCTAGATCA
GCGCTCGCGAAAGGAACTCC

Downstream 100 bases:

>100_bases
GCATGGCCGGGGCCGAACGGCCGGTGTCGTCCGCGGCCGGTCTGCCGGTCCGCTGGGCACTGGCCGTCGTTCTGGCCCTG
CTGGCGATCCAGGCGACCGC

Product: ATP-dependent protease peptidase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MALYSSSADAGPPVWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRKLGKGDVIGGFAGATADAFTLFERLEAK
LEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLEPEAGVMAIGSGGNYALAAARALADTDQDA
ETIVRKALGIAAEICVYTNGNLTLETLTA

Sequences:

>Translated_189_residues
MALYSSSADAGPPVWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRKLGKGDVIGGFAGATADAFTLFERLEAK
LEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLEPEAGVMAIGSGGNYALAAARALADTDQDA
ETIVRKALGIAAEICVYTNGNLTLETLTA
>Mature_188_residues
ALYSSSADAGPPVWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRKLGKGDVIGGFAGATADAFTLFERLEAKL
EQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLEPEAGVMAIGSGGNYALAAARALADTDQDAE
TIVRKALGIAAEICVYTNGNLTLETLTA

Specific function: Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery [H]

COG id: COG5405

COG function: function code O; ATP-dependent protease HslVU (ClpYQ), peptidase subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase T1B family. HslV subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790367, Length=172, Percent_Identity=60.4651162790698, Blast_Score=205, Evalue=2e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022281
- InterPro:   IPR001353 [H]

Pfam domain/function: PF00227 Proteasome [H]

EC number: 3.4.25.-

Molecular weight: Translated: 19796; Mature: 19665

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALYSSSADAGPPVWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRKLGKGDVI
CCEECCCCCCCCCCCCCEEEEEEECCCEEEECCCCCEEHHHHHHHHHHHHHHHCCCCCEE
GGFAGATADAFTLFERLEAKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVS
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCEE
LVLTGTGDVLEPEAGVMAIGSGGNYALAAARALADTDQDAETIVRKALGIAAEICVYTNG
EEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECC
NLTLETLTA
CEEEEEECC
>Mature Secondary Structure 
ALYSSSADAGPPVWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRKLGKGDVI
CEECCCCCCCCCCCCCEEEEEEECCCEEEECCCCCEEHHHHHHHHHHHHHHHCCCCCEE
GGFAGATADAFTLFERLEAKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVS
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCEE
LVLTGTGDVLEPEAGVMAIGSGGNYALAAARALADTDQDAETIVRKALGIAAEICVYTNG
EEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECC
NLTLETLTA
CEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA