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The map label for this gene is gpsA [H]

Identifier: 192288686

GI number: 192288686

Start: 270363

End: 271352

Strand: Reverse

Name: gpsA [H]

Synonym: Rpal_0255

Alternate gene names: 192288686

Gene position: 271352-270363 (Counterclockwise)

Preceding gene: 192288687

Following gene: 192288685

Centisome position: 4.72

GC content: 70.1

Gene sequence:

>990_bases
ATGGGTTCGTTGAATTCGATTGCCGTGCTCGGCGGCGGTGCCTGGGGCACCGCGCTGGCGCAGACTGCTGCGCGCGCCGG
GCGAAAGGTGACGCTGTGGGAGCACGATGCCGGCAACGCCGAGCATCTGATCGCGGCGCGCGAGAGCCGTTTCCTGCCGG
GCGTGCGGCTGGAGCCGTCGATCCAGGTGACGCGCGATCTTGCCGAAGCGGCGCGCGCCGATGCGCTGCTGCTGGTGGTT
CCGGCACAGGTGCTGCGCCAGGTGGTCACGTCGCTGCAGCCGCTGATCGCGCCGCGCACGCCGCTGGTCGCCTGCGCCAA
GGGTATCGAGCACGGCACCCATCGGTTCATGACTGAGATCATTGCCGAAGCGGCGCCCGCCGCGATCCCGGCGATTCTTT
CGGGCCCGAGCTTTGCGGCCGACGTCGCGCGCGGCCTGCCGACCGCGGTGACGATCGCCGCCACTGACGCAGCCTGCGCG
CAGGCGCTGGCCCAGGCGATGAATTCCGGCAGCTTCCGCCCGTATCATTCGACCGATGTTCGCGGCGTCGAACTCGGCGG
CGCCACCAAGAACGTGCTGGCGATCGCGGCCGGCATCGTCGAGGGCCGGCAGCTCGGCGCCTCGGCGCTGGCGGCGATGA
CCACGCGCGGTTTCGTCGAGCTGGTGCGGTTCGGCAAGGCCTATGGGGCGCGGATCGAGACCATGCATGGTCTGTCGGGC
CTCGGCGATCTGACGATGTGCTGCTCGACGCCGCAGTCGCGCAACTTCTCGTTCGGCATGGCGCTCGGCCGCGGCGAAGG
GATCGAGTCCGCCGCGCACGGCAAGCTCGCGGAGGGCTACTACACCGCACCGGTGCTGCTGGAGATGGCGCAGGCGAAAG
GCATCGACATGCCGATCTCGACCGCGGTTGCGGCGGTGCTCGGCGGCAAGCTCAGCGTCGATGCCGCGATCGAAGGGCTG
CTGACGCGCCCGCTCAAGGCGGAGGAATAG

Upstream 100 bases:

>100_bases
GTTGGCTGCTCGACGCCAACGCCACCGCACCGGCGAAATTTGCCAACACGCGTGCCGGGTTCTAAGGCCGGGCTGTGTCG
GTGGCTTGGATGATGTTGCG

Downstream 100 bases:

>100_bases
ACGTGGCGTATTGGCTGGTGAAATCCGAGCCGTCGGTGTGGTCGTGGGACCAGCAGGTCGCCAAAGGCGCCGCTGGCGAA
GCCTGGACCGGCGTGCGCAA

Product: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [H]

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MGSLNSIAVLGGGAWGTALAQTAARAGRKVTLWEHDAGNAEHLIAARESRFLPGVRLEPSIQVTRDLAEAARADALLLVV
PAQVLRQVVTSLQPLIAPRTPLVACAKGIEHGTHRFMTEIIAEAAPAAIPAILSGPSFAADVARGLPTAVTIAATDAACA
QALAQAMNSGSFRPYHSTDVRGVELGGATKNVLAIAAGIVEGRQLGASALAAMTTRGFVELVRFGKAYGARIETMHGLSG
LGDLTMCCSTPQSRNFSFGMALGRGEGIESAAHGKLAEGYYTAPVLLEMAQAKGIDMPISTAVAAVLGGKLSVDAAIEGL
LTRPLKAEE

Sequences:

>Translated_329_residues
MGSLNSIAVLGGGAWGTALAQTAARAGRKVTLWEHDAGNAEHLIAARESRFLPGVRLEPSIQVTRDLAEAARADALLLVV
PAQVLRQVVTSLQPLIAPRTPLVACAKGIEHGTHRFMTEIIAEAAPAAIPAILSGPSFAADVARGLPTAVTIAATDAACA
QALAQAMNSGSFRPYHSTDVRGVELGGATKNVLAIAAGIVEGRQLGASALAAMTTRGFVELVRFGKAYGARIETMHGLSG
LGDLTMCCSTPQSRNFSFGMALGRGEGIESAAHGKLAEGYYTAPVLLEMAQAKGIDMPISTAVAAVLGGKLSVDAAIEGL
LTRPLKAEE
>Mature_328_residues
GSLNSIAVLGGGAWGTALAQTAARAGRKVTLWEHDAGNAEHLIAARESRFLPGVRLEPSIQVTRDLAEAARADALLLVVP
AQVLRQVVTSLQPLIAPRTPLVACAKGIEHGTHRFMTEIIAEAAPAAIPAILSGPSFAADVARGLPTAVTIAATDAACAQ
ALAQAMNSGSFRPYHSTDVRGVELGGATKNVLAIAAGIVEGRQLGASALAAMTTRGFVELVRFGKAYGARIETMHGLSGL
GDLTMCCSTPQSRNFSFGMALGRGEGIESAAHGKLAEGYYTAPVLLEMAQAKGIDMPISTAVAAVLGGKLSVDAAIEGLL
TRPLKAEE

Specific function: De novo phospholipid biosynthesis; glycerol-3 phosphate formation. [C]

COG id: COG0240

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI33695088, Length=351, Percent_Identity=28.4900284900285, Blast_Score=111, Evalue=8e-25,
Organism=Homo sapiens, GI24307999, Length=349, Percent_Identity=24.3553008595989, Blast_Score=89, Evalue=5e-18,
Organism=Escherichia coli, GI1790037, Length=333, Percent_Identity=42.6426426426426, Blast_Score=231, Evalue=7e-62,
Organism=Caenorhabditis elegans, GI32564399, Length=350, Percent_Identity=25.7142857142857, Blast_Score=95, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI193210136, Length=359, Percent_Identity=25.3481894150418, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI32564403, Length=359, Percent_Identity=25.3481894150418, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17507425, Length=351, Percent_Identity=26.4957264957265, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI193210134, Length=332, Percent_Identity=23.4939759036145, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6324513, Length=343, Percent_Identity=26.2390670553936, Blast_Score=101, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6320181, Length=343, Percent_Identity=25.9475218658892, Blast_Score=91, Evalue=3e-19,
Organism=Drosophila melanogaster, GI17136202, Length=345, Percent_Identity=27.536231884058, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI17136204, Length=345, Percent_Identity=27.536231884058, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI17136200, Length=345, Percent_Identity=27.536231884058, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI22026922, Length=350, Percent_Identity=24.5714285714286, Blast_Score=99, Evalue=6e-21,
Organism=Drosophila melanogaster, GI45551945, Length=343, Percent_Identity=24.7813411078717, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI281362270, Length=282, Percent_Identity=26.5957446808511, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24648969, Length=288, Percent_Identity=25.6944444444444, Blast_Score=79, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR006168
- InterPro:   IPR006109
- InterPro:   IPR011128
- InterPro:   IPR016040 [H]

Pfam domain/function: PF07479 NAD_Gly3P_dh_C; PF01210 NAD_Gly3P_dh_N [H]

EC number: =1.1.1.94 [H]

Molecular weight: Translated: 33809; Mature: 33678

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: PS00957 NAD_G3PDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSLNSIAVLGGGAWGTALAQTAARAGRKVTLWEHDAGNAEHLIAARESRFLPGVRLEPS
CCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCC
IQVTRDLAEAARADALLLVVPAQVLRQVVTSLQPLIAPRTPLVACAKGIEHGTHRFMTEI
HHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
IAEAAPAAIPAILSGPSFAADVARGLPTAVTIAATDAACAQALAQAMNSGSFRPYHSTDV
HHHHCCHHHHHHHCCCCHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCC
RGVELGGATKNVLAIAAGIVEGRQLGASALAAMTTRGFVELVRFGKAYGARIETMHGLSG
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC
LGDLTMCCSTPQSRNFSFGMALGRGEGIESAAHGKLAEGYYTAPVLLEMAQAKGIDMPIS
CCCHHHHCCCCCCCCCEEEEEECCCCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHH
TAVAAVLGGKLSVDAAIEGLLTRPLKAEE
HHHHHHHCCCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GSLNSIAVLGGGAWGTALAQTAARAGRKVTLWEHDAGNAEHLIAARESRFLPGVRLEPS
CCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCC
IQVTRDLAEAARADALLLVVPAQVLRQVVTSLQPLIAPRTPLVACAKGIEHGTHRFMTEI
HHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
IAEAAPAAIPAILSGPSFAADVARGLPTAVTIAATDAACAQALAQAMNSGSFRPYHSTDV
HHHHCCHHHHHHHCCCCHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCC
RGVELGGATKNVLAIAAGIVEGRQLGASALAAMTTRGFVELVRFGKAYGARIETMHGLSG
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC
LGDLTMCCSTPQSRNFSFGMALGRGEGIESAAHGKLAEGYYTAPVLLEMAQAKGIDMPIS
CCCHHHHCCCCCCCCCEEEEEECCCCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHH
TAVAAVLGGKLSVDAAIEGLLTRPLKAEE
HHHHHHHCCCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA