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The map label for this gene is 192288681

Identifier: 192288681

GI number: 192288681

Start: 265918

End: 266700

Strand: Reverse

Name: 192288681

Synonym: Rpal_0250

Alternate gene names: NA

Gene position: 266700-265918 (Counterclockwise)

Preceding gene: 192288684

Following gene: 192288680

Centisome position: 4.64

GC content: 65.52

Gene sequence:

>783_bases
ATGGAACGCCCCTGCCTGTTTGGTCTTATGCGTGTCGGGCTGATGCCGGCGCTGGTGCTGACGCTCGGAATCGTCGGCGC
ATCGGCCCAGACCGCCCCCTATGCCAGCAAGGACGCCAAGGACAAGCCGCCGGCCGCAGCACCGGAGCAAGCTCAGACGC
CGGCGGCGCCTGCCACGTCCGCAACTCCGGCGGCCCCCGCCCCTGCCACGCCGCCGGCCGCGAGCGAAGCGCCGGCCGCG
ACGCCTGTTCCCACCACGCCGTCGGCTCCGTCAGCGACCCAGACCCCGGCGGCGCCGTCCGCTCCCGCGCCGGTGCAGAC
CGCCGATCCGTTCGGCGAAGAGAGCACGCTTGAGCCGAAGACGGTGGTGATCCTGAAGGGCAAGGCGAACTGGGACAACG
CCTTCGACAGCCTGATGGACGCGTTCAAGTCGCTGACCGCGCTGCTCGACAAGCAGGGCATCGCGCCGAACGGCAACCCG
ATGATCGTTTACACCTCGACCGACGACGCCGGCTTCACTTTCCAGGCGCAAATCCCGGTGCCGCAGGAACCGAAGAACCT
CGGCAAGTCGATGAGCATCGGCAAGTCGCCCGACGGCAAGGCGCTAAAATTCGTCCACCGCGGCTCCTACGACAACATGG
ACAACACCTACGAGGCGATCACCAACTTCCTCGACGACAAGAAGCTCGAGGCCAAGGATACCTTCATCGAGGAATACATG
ACCGACCCGCTGAAGACCGCCGAAGACAAGCTGGTGATCAACGTTTACGTGCCGATGAAATGA

Upstream 100 bases:

>100_bases
TGTTATGAGAAACCGCTCGACCGGGTGACTCGCGCGAAGTCCGATGCTGCGCCACGCGGGAAGGTCGGGCGACGTTCGCG
GTGGCCTTGGGAGAGATGGA

Downstream 100 bases:

>100_bases
ACATGCTCCGCTCGCTCTCCATCGCTGCCGCCGCCTGTTGTCTGTTCGTCGCGCTCCCGGCCCGCGCCCAGGATGTCCCG
CCGCCGGGCATCGTCGTGCG

Product: transcription activator effector binding

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MERPCLFGLMRVGLMPALVLTLGIVGASAQTAPYASKDAKDKPPAAAPEQAQTPAAPATSATPAAPAPATPPAASEAPAA
TPVPTTPSAPSATQTPAAPSAPAPVQTADPFGEESTLEPKTVVILKGKANWDNAFDSLMDAFKSLTALLDKQGIAPNGNP
MIVYTSTDDAGFTFQAQIPVPQEPKNLGKSMSIGKSPDGKALKFVHRGSYDNMDNTYEAITNFLDDKKLEAKDTFIEEYM
TDPLKTAEDKLVINVYVPMK

Sequences:

>Translated_260_residues
MERPCLFGLMRVGLMPALVLTLGIVGASAQTAPYASKDAKDKPPAAAPEQAQTPAAPATSATPAAPAPATPPAASEAPAA
TPVPTTPSAPSATQTPAAPSAPAPVQTADPFGEESTLEPKTVVILKGKANWDNAFDSLMDAFKSLTALLDKQGIAPNGNP
MIVYTSTDDAGFTFQAQIPVPQEPKNLGKSMSIGKSPDGKALKFVHRGSYDNMDNTYEAITNFLDDKKLEAKDTFIEEYM
TDPLKTAEDKLVINVYVPMK
>Mature_260_residues
MERPCLFGLMRVGLMPALVLTLGIVGASAQTAPYASKDAKDKPPAAAPEQAQTPAAPATSATPAAPAPATPPAASEAPAA
TPVPTTPSAPSATQTPAAPSAPAPVQTADPFGEESTLEPKTVVILKGKANWDNAFDSLMDAFKSLTALLDKQGIAPNGNP
MIVYTSTDDAGFTFQAQIPVPQEPKNLGKSMSIGKSPDGKALKFVHRGSYDNMDNTYEAITNFLDDKKLEAKDTFIEEYM
TDPLKTAEDKLVINVYVPMK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27258; Mature: 27258

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERPCLFGLMRVGLMPALVLTLGIVGASAQTAPYASKDAKDKPPAAAPEQAQTPAAPATS
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ATPAAPAPATPPAASEAPAATPVPTTPSAPSATQTPAAPSAPAPVQTADPFGEESTLEPK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TVVILKGKANWDNAFDSLMDAFKSLTALLDKQGIAPNGNPMIVYTSTDDAGFTFQAQIPV
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEECCC
PQEPKNLGKSMSIGKSPDGKALKFVHRGSYDNMDNTYEAITNFLDDKKLEAKDTFIEEYM
CCCHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH
TDPLKTAEDKLVINVYVPMK
CCHHCCCCCEEEEEEEECCC
>Mature Secondary Structure
MERPCLFGLMRVGLMPALVLTLGIVGASAQTAPYASKDAKDKPPAAAPEQAQTPAAPATS
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ATPAAPAPATPPAASEAPAATPVPTTPSAPSATQTPAAPSAPAPVQTADPFGEESTLEPK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TVVILKGKANWDNAFDSLMDAFKSLTALLDKQGIAPNGNPMIVYTSTDDAGFTFQAQIPV
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEECCC
PQEPKNLGKSMSIGKSPDGKALKFVHRGSYDNMDNTYEAITNFLDDKKLEAKDTFIEEYM
CCCHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH
TDPLKTAEDKLVINVYVPMK
CCHHCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA