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The map label for this gene is yurN [H]

Identifier: 192288564

GI number: 192288564

Start: 144550

End: 145509

Strand: Reverse

Name: yurN [H]

Synonym: Rpal_0131

Alternate gene names: 192288564

Gene position: 145509-144550 (Counterclockwise)

Preceding gene: 192288565

Following gene: 192288563

Centisome position: 2.53

GC content: 64.58

Gene sequence:

>960_bases
ATGTCTGAGGTGGCGATGTCTGACGCTGCCGTCTCGCTGCGCGATCTCGATGCGCTCACAACCGCGCGCGCGTCGGCCAA
GCCGCGTCGCCGTGGCCGCGGCACCGTCGCCTACGGTCTGGTCGCGCCGGCGTTCACGCTGATGCTGCTGATGCTGCTCG
GCCCACTCGCCGGCGTGATCGCGCTGTCGTTCACCGATTATCAGCTCGGCGCGCCGTCGTTCGCCTGGATTGGCCTTGCC
AATTATCAGCAGCTGTTCGCCGACCGGGTGTTCTGGATCTCGCTGATCAATACGTTGACCTATGCGGTGATCGTGGTGCC
GGGCTCGGTCGCGCTCGGCCTCGGCGTGGCGATGCTGATCGAGAGTGGCACGCATCTTCGTGCCTTCTATCGCACCATCT
ACTTTCTGCCGGTGATGGCGACCCTGATCGCGATGGCGATCGTCTGGGAGTTCATGCTGCACCCGCAGTTCGGCCTGGTG
AACGGGCTGATCAAGATGGTCGGCCTCGCGCCGCATCCCTGGCTGCAGGATCGTGGCACCGCGCTGTATGCACTGTGCGC
GATCGGGATCTGGCAGGCGGTCGGTTTCAACATGGTGCTGTTCCTCGCCGGGCTGATGTCGATCCCCAAGCATCTCTATG
ACGCCGCCGAGATCGATGGCGCCGCGAGTGCGTGGTCGCGGTTCCGGCTGGTGACCTGGCCGATGCTCGGACCGGTGACG
CTGTTCGTGGTGGTGATCACCGGCATCCGGTCGTTCCAGGTGTTCGACACTGTGCACGTCCTCACCAAGGGCGGCCCGTC
GAAATCCACCGAGGTGCTGATCCACACCATGTACATGGAGGGCTTCGAGTTCTTCCGCTCCGGCTATGCCGCCGCGGTGA
CCGTGGTGTTCCTCGGCCTGGTGCTGCTGCTGACCCTGGTGAAATCGCGGCTCGCCGCCAAGCAGGTGCACTACGCATGA

Upstream 100 bases:

>100_bases
TTCGGCTTCGCGCCCGAGGCGATCCGGCTGTTCGATGCCGGCGGCAAGCGCATTGCGATCCGGACAGAAGCCTCGGTCGA
GATCATCCGAGAGGTGGCCC

Downstream 100 bases:

>100_bases
GCGCCGCACGACCCAGCCTGATCCGCTCCAGCTTCCGCCACGCCGCTCTGATGGTTGGCGCCGTGCTGATGCTGGCGCCG
TTCGTCTGGATGCTGTCGAC

Product: ABC transporter inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MSEVAMSDAAVSLRDLDALTTARASAKPRRRGRGTVAYGLVAPAFTLMLLMLLGPLAGVIALSFTDYQLGAPSFAWIGLA
NYQQLFADRVFWISLINTLTYAVIVVPGSVALGLGVAMLIESGTHLRAFYRTIYFLPVMATLIAMAIVWEFMLHPQFGLV
NGLIKMVGLAPHPWLQDRGTALYALCAIGIWQAVGFNMVLFLAGLMSIPKHLYDAAEIDGAASAWSRFRLVTWPMLGPVT
LFVVVITGIRSFQVFDTVHVLTKGGPSKSTEVLIHTMYMEGFEFFRSGYAAAVTVVFLGLVLLLTLVKSRLAAKQVHYA

Sequences:

>Translated_319_residues
MSEVAMSDAAVSLRDLDALTTARASAKPRRRGRGTVAYGLVAPAFTLMLLMLLGPLAGVIALSFTDYQLGAPSFAWIGLA
NYQQLFADRVFWISLINTLTYAVIVVPGSVALGLGVAMLIESGTHLRAFYRTIYFLPVMATLIAMAIVWEFMLHPQFGLV
NGLIKMVGLAPHPWLQDRGTALYALCAIGIWQAVGFNMVLFLAGLMSIPKHLYDAAEIDGAASAWSRFRLVTWPMLGPVT
LFVVVITGIRSFQVFDTVHVLTKGGPSKSTEVLIHTMYMEGFEFFRSGYAAAVTVVFLGLVLLLTLVKSRLAAKQVHYA
>Mature_318_residues
SEVAMSDAAVSLRDLDALTTARASAKPRRRGRGTVAYGLVAPAFTLMLLMLLGPLAGVIALSFTDYQLGAPSFAWIGLAN
YQQLFADRVFWISLINTLTYAVIVVPGSVALGLGVAMLIESGTHLRAFYRTIYFLPVMATLIAMAIVWEFMLHPQFGLVN
GLIKMVGLAPHPWLQDRGTALYALCAIGIWQAVGFNMVLFLAGLMSIPKHLYDAAEIDGAASAWSRFRLVTWPMLGPVTL
FVVVITGIRSFQVFDTVHVLTKGGPSKSTEVLIHTMYMEGFEFFRSGYAAAVTVVFLGLVLLLTLVKSRLAAKQVHYA

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=300, Percent_Identity=30.3333333333333, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI1787570, Length=270, Percent_Identity=33.3333333333333, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1790465, Length=254, Percent_Identity=25.5905511811024, Blast_Score=71, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34754; Mature: 34623

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEVAMSDAAVSLRDLDALTTARASAKPRRRGRGTVAYGLVAPAFTLMLLMLLGPLAGVI
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALSFTDYQLGAPSFAWIGLANYQQLFADRVFWISLINTLTYAVIVVPGSVALGLGVAMLI
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHH
ESGTHLRAFYRTIYFLPVMATLIAMAIVWEFMLHPQFGLVNGLIKMVGLAPHPWLQDRGT
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCH
ALYALCAIGIWQAVGFNMVLFLAGLMSIPKHLYDAAEIDGAASAWSRFRLVTWPMLGPVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEECCHHHHHH
LFVVVITGIRSFQVFDTVHVLTKGGPSKSTEVLIHTMYMEGFEFFRSGYAAAVTVVFLGL
HHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
VLLLTLVKSRLAAKQVHYA
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SEVAMSDAAVSLRDLDALTTARASAKPRRRGRGTVAYGLVAPAFTLMLLMLLGPLAGVI
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH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HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]