| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is icc [C]
Identifier: 192288561
GI number: 192288561
Start: 141525
End: 142349
Strand: Reverse
Name: icc [C]
Synonym: Rpal_0128
Alternate gene names: 192288561
Gene position: 142349-141525 (Counterclockwise)
Preceding gene: 192288562
Following gene: 192288560
Centisome position: 2.48
GC content: 63.76
Gene sequence:
>825_bases ATGAAACTGATCCACCTCAGCGACATCCACCTCACCACGCCGGGTGGCACGATCGGCGGTCGCAATCCGCGGCTGAATTT CGAGCGGGCGCTAACCCATATCTTGCGCGACCATCACGATGCCGAACTGATGGTGATCACCGGCGATCTGTCGGATTGGG GCGACGCCGAGGACTATCGCTGGCTGAAGGCGCAGCTGGGTGCGTTTCCGATTCCGGTGCGGCTGTGCATCGGCAATCAC GATCGCCGCGAGAATTTCCTGAGCGTGTTTCCGGAATTCGCCGACGATGATGGGCTGGTCCAAGGCGTGTGCGATACGCC GGCCGGTCGCTGCCTGCTGCTCGATACGGCCGAAGCCGGCACCCATGCGGGGCGTTATTGCGAGACGCGCAGGGCGTGGC TGACCCGGCAGCTCGCCGAACATCCCGGACCGTTTCTGCTGTTCATGCATCACAATCCGATGCCGACGCATCTCGGTCCG ATGGATCAGATCCGGCTGCTCGACGATGGCGCATTCGGCCAGATCGTCGGCCGGCATCGCGACCGCATCCGCCATATTTT CTTCGGCCATTGCCATCTGCCGCTGGCCGGCTCGGTGGCCGGCGTGCCGGTCAGCTCGCTGCGCGGCACCAACCATGCCA GCTATCCGCTGTTCTCCGAGCGCCGGATGCTGAGCGCGTCCGATCTGCCGGAATCCTACGGCGTGGTGTTCTTCGGCGAC GACTACGTCACCGTTCACATGGTCGAGTTCGGTTACACCGGCGAGGTCCGGGTCGAGGGCTCGCCCGATTACAACGCCTG GAACAGGGAGACCATGCTGCGATGA
Upstream 100 bases:
>100_bases AACCTGCTGCCGAAGACCGTCGGCGCCGCCAAGTAACGTAAGAACCTCCCGGCGACGGAGCGCGTCCAGCGCTCCGTCGC GTCACGTTTTGGAGCGGGCC
Downstream 100 bases:
>100_bases AGTTCGTCGTTCTCACCGATACGCATTTCGTCGCCCGCGGTCGCCGCATCTACGGGCTCGACCCGGCCGAACGGCTCAGT GCCGCGGTGGCGCGGATCAA
Product: metallophosphoesterase
Products: NA
Alternate protein names: Ser/Thr Protein Phosphatase Family Protein; Phosphodiesterase; CAMP Phosphodiesterase; Cyclic Nucleotide Phosphodiesterase; Phosphohydrolase; 3 5'-Cyclic-Nucleotide Phosphodiesterase; ICC Protein; Icc Protein; 35'-Cyclic-Nucleotide Phosphodiesterase CpdA; Phosphoesterase; Protein Icc; Cyclic AMP Phosphodiesterase; Calcineurin Phosphoesterase Domain-Containing Protein; Protein Icc-Like Protein; Calcineurin-Like Phosphoesterase Family; Calcineurin-Like Phosphoesterase Family Protein
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MKLIHLSDIHLTTPGGTIGGRNPRLNFERALTHILRDHHDAELMVITGDLSDWGDAEDYRWLKAQLGAFPIPVRLCIGNH DRRENFLSVFPEFADDDGLVQGVCDTPAGRCLLLDTAEAGTHAGRYCETRRAWLTRQLAEHPGPFLLFMHHNPMPTHLGP MDQIRLLDDGAFGQIVGRHRDRIRHIFFGHCHLPLAGSVAGVPVSSLRGTNHASYPLFSERRMLSASDLPESYGVVFFGD DYVTVHMVEFGYTGEVRVEGSPDYNAWNRETMLR
Sequences:
>Translated_274_residues MKLIHLSDIHLTTPGGTIGGRNPRLNFERALTHILRDHHDAELMVITGDLSDWGDAEDYRWLKAQLGAFPIPVRLCIGNH DRRENFLSVFPEFADDDGLVQGVCDTPAGRCLLLDTAEAGTHAGRYCETRRAWLTRQLAEHPGPFLLFMHHNPMPTHLGP MDQIRLLDDGAFGQIVGRHRDRIRHIFFGHCHLPLAGSVAGVPVSSLRGTNHASYPLFSERRMLSASDLPESYGVVFFGD DYVTVHMVEFGYTGEVRVEGSPDYNAWNRETMLR >Mature_274_residues MKLIHLSDIHLTTPGGTIGGRNPRLNFERALTHILRDHHDAELMVITGDLSDWGDAEDYRWLKAQLGAFPIPVRLCIGNH DRRENFLSVFPEFADDDGLVQGVCDTPAGRCLLLDTAEAGTHAGRYCETRRAWLTRQLAEHPGPFLLFMHHNPMPTHLGP MDQIRLLDDGAFGQIVGRHRDRIRHIFFGHCHLPLAGSVAGVPVSSLRGTNHASYPLFSERRMLSASDLPESYGVVFFGD DYVTVHMVEFGYTGEVRVEGSPDYNAWNRETMLR
Specific function: Affects The Expression Of The Lacz Gene. [C]
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30806; Mature: 30806
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIHLSDIHLTTPGGTIGGRNPRLNFERALTHILRDHHDAELMVITGDLSDWGDAEDYR CEEEEEECEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHH WLKAQLGAFPIPVRLCIGNHDRRENFLSVFPEFADDDGLVQGVCDTPAGRCLLLDTAEAG HHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEECCCCC THAGRYCETRRAWLTRQLAEHPGPFLLFMHHNPMPTHLGPMDQIRLLDDGAFGQIVGRHR CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHEEEECCCCHHHHHHHHH DRIRHIFFGHCHLPLAGSVAGVPVSSLRGTNHASYPLFSERRMLSASDLPESYGVVFFGD HHHEEEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEECC DYVTVHMVEFGYTGEVRVEGSPDYNAWNRETMLR CEEEEEEEEECCCCEEEECCCCCCCCCCCHHCCC >Mature Secondary Structure MKLIHLSDIHLTTPGGTIGGRNPRLNFERALTHILRDHHDAELMVITGDLSDWGDAEDYR CEEEEEECEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHH WLKAQLGAFPIPVRLCIGNHDRRENFLSVFPEFADDDGLVQGVCDTPAGRCLLLDTAEAG HHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEECCCCC THAGRYCETRRAWLTRQLAEHPGPFLLFMHHNPMPTHLGPMDQIRLLDDGAFGQIVGRHR CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHEEEECCCCHHHHHHHHH DRIRHIFFGHCHLPLAGSVAGVPVSSLRGTNHASYPLFSERRMLSASDLPESYGVVFFGD HHHEEEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEECC DYVTVHMVEFGYTGEVRVEGSPDYNAWNRETMLR CEEEEEEEEECCCCEEEECCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA