| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192288552
Identifier: 192288552
GI number: 192288552
Start: 131599
End: 131952
Strand: Reverse
Name: 192288552
Synonym: Rpal_0119
Alternate gene names: NA
Gene position: 131952-131599 (Counterclockwise)
Preceding gene: 192288560
Following gene: 192288549
Centisome position: 2.3
GC content: 65.25
Gene sequence:
>354_bases ATGCACCCGTTCAGATGGCAGCGGTCCAGGCAGAGGAGCAGCGCCTTGAGTTTCCTGAAGAAAGCCTTCTACCAAATCCC CGTCATCGGCTGGCTGGTGAAGGATGCCGCGCACGGCAGCCCGGAGGCGCCGTACTTCTTCCTGTTCAATGCCGTCGTGG TCGGCGCCGCGTTGATCTACACCTTCGGCTATCCGCTGGTGATCACCGTCGCGGTGGCCGGCGCGTTCGCCGGGATCGCT GGCTTGGTGGTGCTGACCGCTGGCGATGCTTTCGACAAGCGCGCCAAGCAGCCCGCAACCGACGTCCGCCGCGCCAAGAC GGCGACGGTTCGGCCGCTCAAGAAGGCTGCCTGA
Upstream 100 bases:
>100_bases GCAAATCCGTCGCATTCGTGATTGACAATTTCTGCATTGCGATAGACTAAAGTTTGCAGTGCCACGCCCCCTCGCTGCGG GGCCGCCGCGGGAGCCGCGA
Downstream 100 bases:
>100_bases TCGGCATCTTGTCTCACCGGCGACTTTCGTCGGCAGCTTCCGAAATTCAAAAAATCCCGGCAGGTCGGACCTGCCGGGAT TTTTCATGGTCGCATGTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MHPFRWQRSRQRSSALSFLKKAFYQIPVIGWLVKDAAHGSPEAPYFFLFNAVVVGAALIYTFGYPLVITVAVAGAFAGIA GLVVLTAGDAFDKRAKQPATDVRRAKTATVRPLKKAA
Sequences:
>Translated_117_residues MHPFRWQRSRQRSSALSFLKKAFYQIPVIGWLVKDAAHGSPEAPYFFLFNAVVVGAALIYTFGYPLVITVAVAGAFAGIA GLVVLTAGDAFDKRAKQPATDVRRAKTATVRPLKKAA >Mature_117_residues MHPFRWQRSRQRSSALSFLKKAFYQIPVIGWLVKDAAHGSPEAPYFFLFNAVVVGAALIYTFGYPLVITVAVAGAFAGIA GLVVLTAGDAFDKRAKQPATDVRRAKTATVRPLKKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12709; Mature: 12709
Theoretical pI: Translated: 11.24; Mature: 11.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPFRWQRSRQRSSALSFLKKAFYQIPVIGWLVKDAAHGSPEAPYFFLFNAVVVGAALIY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH TFGYPLVITVAVAGAFAGIAGLVVLTAGDAFDKRAKQPATDVRRAKTATVRPLKKAA HHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHCHHHHCC >Mature Secondary Structure MHPFRWQRSRQRSSALSFLKKAFYQIPVIGWLVKDAAHGSPEAPYFFLFNAVVVGAALIY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH TFGYPLVITVAVAGAFAGIAGLVVLTAGDAFDKRAKQPATDVRRAKTATVRPLKKAA HHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA