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The map label for this gene is ugpE [H]

Identifier: 192288491

GI number: 192288491

Start: 61193

End: 62041

Strand: Reverse

Name: ugpE [H]

Synonym: Rpal_0058

Alternate gene names: 192288491

Gene position: 62041-61193 (Counterclockwise)

Preceding gene: 192288492

Following gene: 192288490

Centisome position: 1.08

GC content: 61.37

Gene sequence:

>849_bases
ATGGTCGAGCGCCGGAAGTTCGGAAACCTGGTGCCGCACCTGATCCTGTGGATCGGCGTCGCGATCGTTGCCTTCCCGGT
CTATCTGGCGTTCGTCGCCTCGACCCAGGACAACGCCACCATCGCCAATGGCCAGATGTCGCTGCTACCCGGCAGCCATT
TCCTGGAAACCTACTACAAGACCATCTTCGTCGGCTCCTCCGGCACCACGCGGGAGCCGGTCGCCAGCATGCTGTTCAAC
TCGTTCGTGATGGCGATGTCGATCGCACTTGGCAAGATCGCGATCTCGATCATCTCCGCCTACGCGATCGTGTACTTCCG
GTTTCCGTTCCGGATGACGATCTTCTGGATCATCTTCATCACGCTGATGCTGCCGGTCGAGGTCCGGATCTATCCGACCT
ACAAGATCGCCGCCGACCTTAATCTGCTGGATAGCTACGCCGGGCTGGCGCTGCCGCTGATCGCGTCGGCAACCGCGACG
CTGCTGTTCCGGCAGTTCTTCATGACGGTGCCGGACGAGCTGTTGGAGGCGTCGCGGATCGACGGCGCTGGGCCGCTGCG
GTTCTTCTGGGATACGCTGCTGCCGCTGTCGCGCACCAATATGGCGGCGCTGTTCGTGATCCTCTTCATCCTCGGCTGGA
ATCAATATCTCTGGCCGCTGCTGATCACCACGCGTGACGACATGCAGACCATCCAGATCGGCATCCGCAAAATGATTGTC
ACCTCGGATGCGCTGACCGAATGGCCGATCGTGATGGCGACCGCGGTGCTGGCGATGCTGCCGCCGGTCGCCGTGGTGGT
GCTGATGCAGAAGCTGTTCGTGCGCGGACTGGTCGAGACGGAGAAGTAA

Upstream 100 bases:

>100_bases
ACCTTGGCAGTTCGGCGGCTCAGTCGGTGATCCTGATGGCGATCGTGATTGCACTAACCGCGATCCAGTTCCGCTTCGTC
GAGCGCAAGGTGAATTACTG

Downstream 100 bases:

>100_bases
TCGTGGCTGATGTCGTTCTCCGCAATGTCCGCAAGACCTATCCGGGTGGCTTCGAGGCCATCAAGGGTGTCGATTTCGCG
GTCGGCGATGGCCAGTTCTG

Product: ABC transporter inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MVERRKFGNLVPHLILWIGVAIVAFPVYLAFVASTQDNATIANGQMSLLPGSHFLETYYKTIFVGSSGTTREPVASMLFN
SFVMAMSIALGKIAISIISAYAIVYFRFPFRMTIFWIIFITLMLPVEVRIYPTYKIAADLNLLDSYAGLALPLIASATAT
LLFRQFFMTVPDELLEASRIDGAGPLRFFWDTLLPLSRTNMAALFVILFILGWNQYLWPLLITTRDDMQTIQIGIRKMIV
TSDALTEWPIVMATAVLAMLPPVAVVVLMQKLFVRGLVETEK

Sequences:

>Translated_282_residues
MVERRKFGNLVPHLILWIGVAIVAFPVYLAFVASTQDNATIANGQMSLLPGSHFLETYYKTIFVGSSGTTREPVASMLFN
SFVMAMSIALGKIAISIISAYAIVYFRFPFRMTIFWIIFITLMLPVEVRIYPTYKIAADLNLLDSYAGLALPLIASATAT
LLFRQFFMTVPDELLEASRIDGAGPLRFFWDTLLPLSRTNMAALFVILFILGWNQYLWPLLITTRDDMQTIQIGIRKMIV
TSDALTEWPIVMATAVLAMLPPVAVVVLMQKLFVRGLVETEK
>Mature_282_residues
MVERRKFGNLVPHLILWIGVAIVAFPVYLAFVASTQDNATIANGQMSLLPGSHFLETYYKTIFVGSSGTTREPVASMLFN
SFVMAMSIALGKIAISIISAYAIVYFRFPFRMTIFWIIFITLMLPVEVRIYPTYKIAADLNLLDSYAGLALPLIASATAT
LLFRQFFMTVPDELLEASRIDGAGPLRFFWDTLLPLSRTNMAALFVILFILGWNQYLWPLLITTRDDMQTIQIGIRKMIV
TSDALTEWPIVMATAVLAMLPPVAVVVLMQKLFVRGLVETEK

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=282, Percent_Identity=58.1560283687943, Blast_Score=335, Evalue=2e-93,
Organism=Escherichia coli, GI1787571, Length=185, Percent_Identity=27.5675675675676, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1790464, Length=212, Percent_Identity=28.3018867924528, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31620; Mature: 31620

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVERRKFGNLVPHLILWIGVAIVAFPVYLAFVASTQDNATIANGQMSLLPGSHFLETYYK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEECCCHHHHHHHHH
TIFVGSSGTTREPVASMLFNSFVMAMSIALGKIAISIISAYAIVYFRFPFRMTIFWIIFI
HHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLMLPVEVRIYPTYKIAADLNLLDSYAGLALPLIASATATLLFRQFFMTVPDELLEASRI
HHHCCCEEEEEECEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
DGAGPLRFFWDTLLPLSRTNMAALFVILFILGWNQYLWPLLITTRDDMQTIQIGIRKMIV
CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHEEECCCHHHHHHHHHHHHHH
TSDALTEWPIVMATAVLAMLPPVAVVVLMQKLFVRGLVETEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVERRKFGNLVPHLILWIGVAIVAFPVYLAFVASTQDNATIANGQMSLLPGSHFLETYYK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEECCCHHHHHHHHH
TIFVGSSGTTREPVASMLFNSFVMAMSIALGKIAISIISAYAIVYFRFPFRMTIFWIIFI
HHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLMLPVEVRIYPTYKIAADLNLLDSYAGLALPLIASATATLLFRQFFMTVPDELLEASRI
HHHCCCEEEEEECEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
DGAGPLRFFWDTLLPLSRTNMAALFVILFILGWNQYLWPLLITTRDDMQTIQIGIRKMIV
CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHEEECCCHHHHHHHHHHHHHH
TSDALTEWPIVMATAVLAMLPPVAVVVLMQKLFVRGLVETEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11481431 [H]