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The map label for this gene is nahD [H]

Identifier: 192288456

GI number: 192288456

Start: 24176

End: 24778

Strand: Reverse

Name: nahD [H]

Synonym: Rpal_0023

Alternate gene names: 192288456

Gene position: 24778-24176 (Counterclockwise)

Preceding gene: 192288458

Following gene: 192288455

Centisome position: 0.43

GC content: 61.53

Gene sequence:

>603_bases
ATGACCCAGCCCCCACCGCAATTCCTGTTCGACTTCGGCAGCCCCAACGCTTTCCTGGCCCACGAGGCGATCCCAGCGAT
CGAGCAGCGGATCGGCGTCAAATTCGACTACGTGCCGGTGCTACTGGGCGGTATCTTCAAGGCGACCAACAACAAGTCGC
CGGCGGAGACGCTGGCCGGAATCAAGAATAAGCGCGAATTCCTGGTGGTGGAAACCGAGCGCTTCCTCAAGCGCTATGCG
GTCAAGCCGTATGTGTGGAATCCGCATTTTCCGGTCAACACGCTCAACCTGATGCGTGCTGCAGTCGCGGCGCAGCTCGA
AGGCGTGTTCGAGAAGTATGTCGAGGCCGCGTTCCACCATATGTGGGTGGAGCCGAAGAAGATGGACGATCTCGAAGTCG
CCGCGGCGGCGCTGTCATCCTCCGGGCTCGACGGCAAGGCCTTGCTGACCCGCGCTCAGGAGCCGGAGGTGAAGGCGAAG
CTCATCGCCAACACCGAAGACGCCGTGCAGCGCGGCGTGTTCGGCTCACCGACCTTCTTCGTCGGCAAGGAGATGTTCTT
CGGCAAGGAACAGCTCCGCGATGTCGAAGAGCTGTACGGCTGA

Upstream 100 bases:

>100_bases
CTGGACCGCGACCCGGTTGATCGGCCGCGGCGGACGCGCTACGGTCGGCATGGGATGACGACAATCATATAAGGCGACCC
CGCCGCTGCCGGAGGAGATC

Downstream 100 bases:

>100_bases
GCGTTGCCTGCGACATCGTCCTTGAAGAGCGGAGCGACGAAGCAATCCAGTCCCGCCGTTCTGAAAACGTGGATTGCTTT
GCTTCGCTCGCAATGACAAG

Product: DSBA oxidoreductase

Products: NA

Alternate protein names: HCCA isomerase [H]

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MTQPPPQFLFDFGSPNAFLAHEAIPAIEQRIGVKFDYVPVLLGGIFKATNNKSPAETLAGIKNKREFLVVETERFLKRYA
VKPYVWNPHFPVNTLNLMRAAVAAQLEGVFEKYVEAAFHHMWVEPKKMDDLEVAAAALSSSGLDGKALLTRAQEPEVKAK
LIANTEDAVQRGVFGSPTFFVGKEMFFGKEQLRDVEELYG

Sequences:

>Translated_200_residues
MTQPPPQFLFDFGSPNAFLAHEAIPAIEQRIGVKFDYVPVLLGGIFKATNNKSPAETLAGIKNKREFLVVETERFLKRYA
VKPYVWNPHFPVNTLNLMRAAVAAQLEGVFEKYVEAAFHHMWVEPKKMDDLEVAAAALSSSGLDGKALLTRAQEPEVKAK
LIANTEDAVQRGVFGSPTFFVGKEMFFGKEQLRDVEELYG
>Mature_199_residues
TQPPPQFLFDFGSPNAFLAHEAIPAIEQRIGVKFDYVPVLLGGIFKATNNKSPAETLAGIKNKREFLVVETERFLKRYAV
KPYVWNPHFPVNTLNLMRAAVAAQLEGVFEKYVEAAFHHMWVEPKKMDDLEVAAAALSSSGLDGKALLTRAQEPEVKAKL
IANTEDAVQRGVFGSPTFFVGKEMFFGKEQLRDVEELYG

Specific function: Catalyzes the isomerization of 2-hydroxychromene-2- carboxylate (HCCA) to trans-O-hydroxybenzylidenepyruvate (THBPA). The reaction is reversible [H]

COG id: COG3917

COG function: function code Q; 2-hydroxychromene-2-carboxylate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001853
- InterPro:   IPR014440
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01323 DSBA [H]

EC number: NA

Molecular weight: Translated: 22348; Mature: 22217

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPPPQFLFDFGSPNAFLAHEAIPAIEQRIGVKFDYVPVLLGGIFKATNNKSPAETLAG
CCCCCHHHHEECCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHH
IKNKREFLVVETERFLKRYAVKPYVWNPHFPVNTLNLMRAAVAAQLEGVFEKYVEAAFHH
CCCCCEEEEEHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MWVEPKKMDDLEVAAAALSSSGLDGKALLTRAQEPEVKAKLIANTEDAVQRGVFGSPTFF
HCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHCCCHHHHHHCCCCCCCHH
VGKEMFFGKEQLRDVEELYG
HHHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure 
TQPPPQFLFDFGSPNAFLAHEAIPAIEQRIGVKFDYVPVLLGGIFKATNNKSPAETLAG
CCCCHHHHEECCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHH
IKNKREFLVVETERFLKRYAVKPYVWNPHFPVNTLNLMRAAVAAQLEGVFEKYVEAAFHH
CCCCCEEEEEHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MWVEPKKMDDLEVAAAALSSSGLDGKALLTRAQEPEVKAKLIANTEDAVQRGVFGSPTFF
HCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHCCCHHHHHHCCCCCCCHH
VGKEMFFGKEQLRDVEELYG
HHHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8002605; 1447127 [H]