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The map label for this gene is rpoN

Identifier: 191637208

GI number:

Start: 389144

End: 390469

Strand: Direct

Name: rpoN

Synonym: LCABL_03900

Alternate gene names: NA

Gene position: NA

Preceding gene: 191637207

Following gene: 191637209

Centisome position: NA

GC content: NA

Gene sequence:

>1326_bases
ATGGACAACACAAAGGGAAAGACAATCAAAATGGATCAATCTATTAGACTCAATCAACGGCAAATCAATAAGTTGGTGCT
AACGCAAGGCATGCGACAGTCAATTCAGATGTTGCAATTAGACGCCGTTGATTTAGATGCATATCTCAAAGACGTTGCTG
AATCGAACCCTTTTATTGAAGTACGCTCTCATTTTGAGCGGGCAGAAGATTCATTATCTGGCGCAACATTTGAAGAAATG
TCGGCTGGGAGCAGTACCGAAAATCTTTTTGATCATTTATTAATGCAAGTTCAACTTTCACTAGCTGGGAATCCTTTGCG
CCAAATCGTCGTTTATTTAATCAATCAACTAAATAACAATGGCTATCTGATTCTGGAGGATAGACAGATCGTGGATGAGA
TCGGTATTTCTCCCGAAAAATTGACCGAAGCTATGCGGTTACTGCAGGGACTAGATCCCCCCGGTGTTGGCGCCCGTAAT
CTTCAAGAGTGTCTATCACTGCAGGCCCATCGTGATACTGGCATACCAAAGGGAGTTATTGCCATACTTGATCAGGATTT
TGAACTGCTAGTTTCGCATGATATGACACGCATTTGCGAAAAGAACAATTTGTCGACGACCGAACTACACAATGCGCTTG
ACTTCATAAAATCTCTTTCGGCTGCTCCTGGGAAAGTATTTGAGCAACCGCAACCAATTTCGTATATTATTCCAGATGCA
AGGCTGAGTGTTACTAATGATGGTCAACTTAAACTATGGCTGACAAAGTGGGGTCGCCCTGAGCTGGTATTTGCAGAAAA
AACTTATCAAGACCTGAAAAAATCAGCAGATTCAGCGACACAACAGTACCTTAAAGAAAAGCACGAGGAGTATTTGTCCC
TGCAACACGGTCTACAACGCCGCGAGGAGACTTTACTTGCGACAGTTAATCAAATTGTTGTGAACCAACATGCATTTTTA
TTACATCAAGCGGCTTTGGCACCGTTACTTCTTAGAGATGTTGCAAAAGCACTTCAAGTCAACGAATCGACTGTGAGTCG
AACAATTAAGGGGAAACATTTACAGACAGATCTTGGCATTTTTGCCTTTAAGGACTTTTTTTCGAAGCGTACACAGGCTG
TATCAAGTAGTGCCTATCATTCTGTTGATCAGTTGAAATTTACAATGATGCAGTTGATTCAGTCTGAAAATAAAATGTGT
CCAGCAAGTGACAACCTTTTAGTCAAATGGTTGTACGAAAAAGGCTTTAAAGTTGCTCGGCGTACGGTAACCAAGTATCG
CAATGAGCTCGGGCTTCCTGCTGCTTCAGCGCGAAAATCGAGATGA

Upstream 100 bases:

>100_bases
GGGCTTTGAGAAATATTGAAAGCTCATATGGGATCAAAGTCGATCAAAATGAGTTGAACTATCTCTATGACATTGTGTTT
CAGCTATAGATTATCTTTGG

Downstream 100 bases:

>100_bases
CTGAAATAAAAAAATTTTTCGTGCTCATAGTCGTTAACTGGACTGATAATTAAAAAATGGATTTGCAACAAAAAGTGCCT
GCCATTCGTGGAACTTGAAT

Product: Sigma 54 transcription factor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>441_residues
MDNTKGKTIKMDQSIRLNQRQINKLVLTQGMRQSIQMLQLDAVDLDAYLKDVAESNPFIEVRSHFERAEDSLSGATFEEM
SAGSSTENLFDHLLMQVQLSLAGNPLRQIVVYLINQLNNNGYLILEDRQIVDEIGISPEKLTEAMRLLQGLDPPGVGARN
LQECLSLQAHRDTGIPKGVIAILDQDFELLVSHDMTRICEKNNLSTTELHNALDFIKSLSAAPGKVFEQPQPISYIIPDA
RLSVTNDGQLKLWLTKWGRPELVFAEKTYQDLKKSADSATQQYLKEKHEEYLSLQHGLQRREETLLATVNQIVVNQHAFL
LHQAALAPLLLRDVAKALQVNESTVSRTIKGKHLQTDLGIFAFKDFFSKRTQAVSSSAYHSVDQLKFTMMQLIQSENKMC
PASDNLLVKWLYEKGFKVARRTVTKYRNELGLPAASARKSR

Sequences:
NA

Specific function: NA

COG id: COG1508

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA