Definition Rhizobium etli CIAT 652 plasmid pC, complete sequence.
Accession NC_010997
Length 1,091,523

Click here to switch to the map view.

The map label for this gene is 190895217

Identifier: 190895217

GI number: 190895217

Start: 983240

End: 983449

Strand: Reverse

Name: 190895217

Synonym: RHECIAT_PC0000890

Alternate gene names: NA

Gene position: 983449-983240 (Counterclockwise)

Preceding gene: 190895218

Following gene: 190895216

Centisome position: 90.1

GC content: 61.43

Gene sequence:

>210_bases
ATGACCGCGGGCGTCGCCTTTCACAACGTCAAGGAGACGACAATGACCACTTGCATCGACGAAATCATCGAACTGCTCAG
CGCCGAGTTGCGGAACGCCGATCCCGCCGAGCGCCGCCAGATCGAGAACGAACTCGAACTGGCGCTGGCTGAACGCGAAG
TAATCTGGGCCGAACAGGACGGCCGGATCGACGCCGAGCCTCCGTTCTGA

Upstream 100 bases:

>100_bases
TTTTGCCTCCGCTTCGGTTCCCTCCGCTGCAACAAAATCGGCTCCCCCACTCGCCGGCTCCGCCGGTTGCGTCCGCAATC
CTTGACCCCTCCATCCCGCC

Downstream 100 bases:

>100_bases
CGGAGGCTTCTTGCCGCATTCACGAGCCCGGCGCCGGATCGACCGGCCGCCAGGCTGTCAGGGATTTCATCCCTCGACAC
TCCCGCCGGCTCACGCCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 69; Mature: 68

Protein sequence:

>69_residues
MTAGVAFHNVKETTMTTCIDEIIELLSAELRNADPAERRQIENELELALAEREVIWAEQDGRIDAEPPF

Sequences:

>Translated_69_residues
MTAGVAFHNVKETTMTTCIDEIIELLSAELRNADPAERRQIENELELALAEREVIWAEQDGRIDAEPPF
>Mature_68_residues
TAGVAFHNVKETTMTTCIDEIIELLSAELRNADPAERRQIENELELALAEREVIWAEQDGRIDAEPPF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7812; Mature: 7681

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAGVAFHNVKETTMTTCIDEIIELLSAELRNADPAERRQIENELELALAEREVIWAEQD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCCC
GRIDAEPPF
CCCCCCCCC
>Mature Secondary Structure 
TAGVAFHNVKETTMTTCIDEIIELLSAELRNADPAERRQIENELELALAEREVIWAEQD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCCC
GRIDAEPPF
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA