| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894916
Identifier: 190894916
GI number: 190894916
Start: 634878
End: 635186
Strand: Reverse
Name: 190894916
Synonym: RHECIAT_PC0000581
Alternate gene names: NA
Gene position: 635186-634878 (Counterclockwise)
Preceding gene: 190894917
Following gene: 190894915
Centisome position: 58.19
GC content: 55.02
Gene sequence:
>309_bases TTGTCCGCGGGCTTCCGATATCCGCCTCGACGTCGACTTTCCCGCACTTTGCCACCGACAATCAGCTTGAAAATGACTGC GCGATGCGTCGAGCGCCGCGGGCCCGTTCGCGCATGGCTTCGTGTTCGATCGTCGCGACTGTCGCGGCGCCGAAAAAATT GTGTTTTTCTCGAATACGAATTGTGTACGCAAAGTACACAATCGTTGACTCCTGCCGAAAGGCGTGTCATCTTTCCTGCA GTAGAGCAACGAATGGCCGGAGATCGACGATGGCGAAGACACCCAAGAGCAATCTCTACGAAGATCTGA
Upstream 100 bases:
>100_bases GCGTGCTCGCCGCCTGAATTTTTCGGGGAGCGCTGACGCCGGCGCTCCCCGATCAAGCCGGGCAGCGGCCGATAGACGTT TCTGATGCCCCTGCGCAGCT
Downstream 100 bases:
>100_bases AACGCCAGATTCTGACGATGGAACTGGACCCGGACGCCGATCTGGACGAGGCCAGTTTGAGCGAAAGGTACGGGCTTTCC CGGACGCCGGTGCGCGACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MSAGFRYPPRRRLSRTLPPTISLKMTARCVERRGPVRAWLRVRSSRLSRRRKNCVFLEYELCTQSTQSLTPAERRVIFPA VEQRMAGDRRWRRHPRAISTKI
Sequences:
>Translated_102_residues MSAGFRYPPRRRLSRTLPPTISLKMTARCVERRGPVRAWLRVRSSRLSRRRKNCVFLEYELCTQSTQSLTPAERRVIFPA VEQRMAGDRRWRRHPRAISTKI >Mature_101_residues SAGFRYPPRRRLSRTLPPTISLKMTARCVERRGPVRAWLRVRSSRLSRRRKNCVFLEYELCTQSTQSLTPAERRVIFPAV EQRMAGDRRWRRHPRAISTKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12124; Mature: 11993
Theoretical pI: Translated: 12.47; Mature: 12.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAGFRYPPRRRLSRTLPPTISLKMTARCVERRGPVRAWLRVRSSRLSRRRKNCVFLEYE CCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEEHH LCTQSTQSLTPAERRVIFPAVEQRMAGDRRWRRHPRAISTKI HHHCCCCCCCHHHHEEECHHHHHHHCCHHHHHHCCCCCCCCC >Mature Secondary Structure SAGFRYPPRRRLSRTLPPTISLKMTARCVERRGPVRAWLRVRSSRLSRRRKNCVFLEYE CCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEEHH LCTQSTQSLTPAERRVIFPAVEQRMAGDRRWRRHPRAISTKI HHHCCCCCCCHHHHEEECHHHHHHHCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA