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The map label for this gene is dapAc4 [H]

Identifier: 190894914

GI number: 190894914

Start: 633293

End: 634204

Strand: Reverse

Name: dapAc4 [H]

Synonym: RHECIAT_PC0000579

Alternate gene names: 190894914

Gene position: 634204-633293 (Counterclockwise)

Preceding gene: 190894915

Following gene: 190894913

Centisome position: 58.1

GC content: 62.61

Gene sequence:

>912_bases
GTGAAGTTTGAGGGGATCTACACGCCGGCGGTAACGCCGCTCGATCGAGATGGTCAGATCGACCGGGCCGGATTTGCAGC
CGTGCTCGAGTCGCTGATCGAAGCGGGCGTCCACGGCATCATCGTCGGCGGCTCGACCGGCGAATACTACGCTCAGAGCA
GCCAGGAGCGTTTCGAGCTCGGGGCCTATGCCAAGGAGGTCATCGGCACGCGGCTGCCGCTCATCATCGGCACCGGCGCC
ACGCGCACCGAGGATTCGGTCGAATATGCCAAGGCTGCAAAGGAAATCGGCGCGGATGCGATCCTGGTGTCGTCACCGCC
CTATGCGCTGCCGACCGAACGCGAGAACGCGGTCCATGCCCTGACGGTCGATCGCGCCGCCAACCTGCCGATCATGCTCT
ACAACTATCCCGCCCGTATGGGTGTGGTGATGGGCGAGGAGTATTTCTCCCGCGTCGGCAAGTCGAAGAACGTCGTCGCC
ATCAAGGAAAGCTCCGGCGACATGGGCAATCTTCACCGGCTCGCCCGGAAATTTCCGCACATTGCGCTGTCCTGCGGCTG
GGACGACCAGGCGCTCGAATTCTTCGCCTGGGGTGCGAAGAGCTGGGTCTGCGCCGGCTCCAATTTCCTGCCGCGCGAGC
ATGTCGCCCTCTATGAGGCCTGCGTCCTCGAGAAGAATTTCGACAAGGGCCGGGCGATCATGAGCGCGATGCTGCCGCTG
ATGGACTTCCTCGAATGCGGGAAATTCGTCCAGTCGATCAAGCACGGATGCGAGATCATCGGCCTCAAAGCCGGTCCGGT
GCGGGCGCCGCTGCGCGGACTGAACTCCGAAGAGAAAAGAACCCTTGAGACCGTCGTTTCCACGTTGAAGCGCACGATCG
GCCAGATCACGTCGGGAGCCAACCATGCATGA

Upstream 100 bases:

>100_bases
AATTGTCTCGCGAGAACATGGAGATGTTCATCGCACCGCAAGGCCTCAAGGCGGACGCCTTCGTCGGCGGTCCAGCCACG
CAAATATTGGAGAAGTCATC

Downstream 100 bases:

>100_bases
ACCTTTGACCGCCGCCGAATACAAGGCGATTGCCGCCGGTCTTCAACTTCCGACGAATGCCTTCATCGATGGTGCATTCC
GTCCGGCAAATTCCGGCAAG

Product: dihydrodipicolinate synthase

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MKFEGIYTPAVTPLDRDGQIDRAGFAAVLESLIEAGVHGIIVGGSTGEYYAQSSQERFELGAYAKEVIGTRLPLIIGTGA
TRTEDSVEYAKAAKEIGADAILVSSPPYALPTERENAVHALTVDRAANLPIMLYNYPARMGVVMGEEYFSRVGKSKNVVA
IKESSGDMGNLHRLARKFPHIALSCGWDDQALEFFAWGAKSWVCAGSNFLPREHVALYEACVLEKNFDKGRAIMSAMLPL
MDFLECGKFVQSIKHGCEIIGLKAGPVRAPLRGLNSEEKRTLETVVSTLKRTIGQITSGANHA

Sequences:

>Translated_303_residues
MKFEGIYTPAVTPLDRDGQIDRAGFAAVLESLIEAGVHGIIVGGSTGEYYAQSSQERFELGAYAKEVIGTRLPLIIGTGA
TRTEDSVEYAKAAKEIGADAILVSSPPYALPTERENAVHALTVDRAANLPIMLYNYPARMGVVMGEEYFSRVGKSKNVVA
IKESSGDMGNLHRLARKFPHIALSCGWDDQALEFFAWGAKSWVCAGSNFLPREHVALYEACVLEKNFDKGRAIMSAMLPL
MDFLECGKFVQSIKHGCEIIGLKAGPVRAPLRGLNSEEKRTLETVVSTLKRTIGQITSGANHA
>Mature_303_residues
MKFEGIYTPAVTPLDRDGQIDRAGFAAVLESLIEAGVHGIIVGGSTGEYYAQSSQERFELGAYAKEVIGTRLPLIIGTGA
TRTEDSVEYAKAAKEIGADAILVSSPPYALPTERENAVHALTVDRAANLPIMLYNYPARMGVVMGEEYFSRVGKSKNVVA
IKESSGDMGNLHRLARKFPHIALSCGWDDQALEFFAWGAKSWVCAGSNFLPREHVALYEACVLEKNFDKGRAIMSAMLPL
MDFLECGKFVQSIKHGCEIIGLKAGPVRAPLRGLNSEEKRTLETVVSTLKRTIGQITSGANHA

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Homo sapiens, GI31543060, Length=286, Percent_Identity=26.5734265734266, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI13540533, Length=298, Percent_Identity=26.8456375838926, Blast_Score=76, Evalue=4e-14,
Organism=Escherichia coli, GI1786463, Length=223, Percent_Identity=32.2869955156951, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI87082415, Length=268, Percent_Identity=29.1044776119403, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1788823, Length=293, Percent_Identity=26.2798634812287, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1789620, Length=198, Percent_Identity=30.8080808080808, Blast_Score=99, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 32868; Mature: 32868

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFEGIYTPAVTPLDRDGQIDRAGFAAVLESLIEAGVHGIIVGGSTGEYYAQSSQERFEL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCHHHHHH
GAYAKEVIGTRLPLIIGTGATRTEDSVEYAKAAKEIGADAILVSSPPYALPTERENAVHA
HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEE
LTVDRAANLPIMLYNYPARMGVVMGEEYFSRVGKSKNVVAIKESSGDMGNLHRLARKFPH
EEECCCCCCCEEEEECCCHHHHEECHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCC
IALSCGWDDQALEFFAWGAKSWVCAGSNFLPREHVALYEACVLEKNFDKGRAIMSAMLPL
EEEECCCCHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
MDFLECGKFVQSIKHGCEIIGLKAGPVRAPLRGLNSEEKRTLETVVSTLKRTIGQITSGA
HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
NHA
CCC
>Mature Secondary Structure
MKFEGIYTPAVTPLDRDGQIDRAGFAAVLESLIEAGVHGIIVGGSTGEYYAQSSQERFEL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCHHHHHH
GAYAKEVIGTRLPLIIGTGATRTEDSVEYAKAAKEIGADAILVSSPPYALPTERENAVHA
HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEE
LTVDRAANLPIMLYNYPARMGVVMGEEYFSRVGKSKNVVAIKESSGDMGNLHRLARKFPH
EEECCCCCCCEEEEECCCHHHHEECHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCC
IALSCGWDDQALEFFAWGAKSWVCAGSNFLPREHVALYEACVLEKNFDKGRAIMSAMLPL
EEEECCCCHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
MDFLECGKFVQSIKHGCEIIGLKAGPVRAPLRGLNSEEKRTLETVVSTLKRTIGQITSGA
HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
NHA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA