| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is opuAC [H]
Identifier: 190894911
GI number: 190894911
Start: 629510
End: 630361
Strand: Reverse
Name: opuAC [H]
Synonym: RHECIAT_PC0000576
Alternate gene names: 190894911
Gene position: 630361-629510 (Counterclockwise)
Preceding gene: 190894912
Following gene: 190894910
Centisome position: 57.75
GC content: 58.8
Gene sequence:
>852_bases ATGAAGACTTTGTGGAAGGCTCTCTGCGCCGCTGCGGTGATCGGGATGAGCATCCTGCCTGCCCGTGCGGAGGAAAAGAC GATCACTCTGGGCACGATGGCGTGGGAAGACCTGACGCCGATCACCGGCATTACCAAGAAGGTTCTGGAAGACGCCGGCT ATACCGTGAAGGTCACCGAATTTTCCGAATGGGGCATTGCCTATGCCGCTCTCGCGAAGGGCGATATCCAAGCTCTGACC TCGCAGACCGATTACGTCGCTCAGGACTATTGGGACAAGAACAAGAACCGCCTCGAGAAGATTTCTCCGGTTTCGCATGG CCTCTATCAGGGCGTGGCCGTTCCGAAATATGTCCCGATCGACTCGCTCGAACAGCTCAATGAAAACGCCGACAAGTTCG GCGGCAAGATCATCGGCATCGAGCCGGGCGCCGGCCTGATGCGCGATACCTCGAATGCGGTCAAGGAATACGGCCTCAAG CTCCAGCTCGTCGAAGGCAGCACGGCTGCGATGACGGCGGCGCTGAAGTCTGCCTACGACCGCCAGGAATGGATTGCGGT GACGATCTGGGAGCCGTCGTGGATGGTCCAGAAGTACGAGGTCAAGTACCTCAAGGATCCGAAGGGCGTCTTCCCGCCGC CGCAGAGCTACTACTGGATCGGCCACAAGGGCTTCTCGGAAGAATATCCGCATGCCCGCGAAGTCATGGCCAGCGTCTAC GTGCCGATCGCCGACATCACCACCATCAACGGTGCAGTCAAGGACGGCAAGACGATGGACCAGGCCGTGCAGGACTGGAT CGGCAGCCATGCCGACCTGATCAAGCGCTGGGAAAACATCAAGAAGAAGTAA
Upstream 100 bases:
>100_bases GCGTGCGGGCCGCGAGGGATGAACCCTCGGCTCACGCAATAGGAAGACTGCCGCCCGCAGGCTTCGATGAGAATGGGAAC TAAAACCAGGAGTAACAACA
Downstream 100 bases:
>100_bases ATGCCGCGTGGCCGTCCGAACCCTCGGGCGGCCACCCTGAAACCTAAGAAAGAAGCCAGCGCCATTGGCTCAAAGGGGAT CGCTATGAAAACCGCCAATA
Product: putative glycine betaine/L-proline ABC transporter substrate-binding protein
Products: ADP; phosphate; L-proline [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MKTLWKALCAAAVIGMSILPARAEEKTITLGTMAWEDLTPITGITKKVLEDAGYTVKVTEFSEWGIAYAALAKGDIQALT SQTDYVAQDYWDKNKNRLEKISPVSHGLYQGVAVPKYVPIDSLEQLNENADKFGGKIIGIEPGAGLMRDTSNAVKEYGLK LQLVEGSTAAMTAALKSAYDRQEWIAVTIWEPSWMVQKYEVKYLKDPKGVFPPPQSYYWIGHKGFSEEYPHAREVMASVY VPIADITTINGAVKDGKTMDQAVQDWIGSHADLIKRWENIKKK
Sequences:
>Translated_283_residues MKTLWKALCAAAVIGMSILPARAEEKTITLGTMAWEDLTPITGITKKVLEDAGYTVKVTEFSEWGIAYAALAKGDIQALT SQTDYVAQDYWDKNKNRLEKISPVSHGLYQGVAVPKYVPIDSLEQLNENADKFGGKIIGIEPGAGLMRDTSNAVKEYGLK LQLVEGSTAAMTAALKSAYDRQEWIAVTIWEPSWMVQKYEVKYLKDPKGVFPPPQSYYWIGHKGFSEEYPHAREVMASVY VPIADITTINGAVKDGKTMDQAVQDWIGSHADLIKRWENIKKK >Mature_283_residues MKTLWKALCAAAVIGMSILPARAEEKTITLGTMAWEDLTPITGITKKVLEDAGYTVKVTEFSEWGIAYAALAKGDIQALT SQTDYVAQDYWDKNKNRLEKISPVSHGLYQGVAVPKYVPIDSLEQLNENADKFGGKIIGIEPGAGLMRDTSNAVKEYGLK LQLVEGSTAAMTAALKSAYDRQEWIAVTIWEPSWMVQKYEVKYLKDPKGVFPPPQSYYWIGHKGFSEEYPHAREVMASVY VPIADITTINGAVKDGKTMDQAVQDWIGSHADLIKRWENIKKK
Specific function: Involved in a multicomponent binding-protein-dependent transport system for glycine betaine [H]
COG id: COG2113
COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components
Gene ontology:
Cell location: Cell membrane; Lipid-anchor [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007210 [H]
Pfam domain/function: PF04069 OpuAC [H]
EC number: NA
Molecular weight: Translated: 31496; Mature: 31496
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLWKALCAAAVIGMSILPARAEEKTITLGTMAWEDLTPITGITKKVLEDAGYTVKVTE CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHHCCCCHHHHHHHHHHHCCCEEEEEE FSEWGIAYAALAKGDIQALTSQTDYVAQDYWDKNKNRLEKISPVSHGLYQGVAVPKYVPI CCCCCHHHHHHHCCHHHHHHCCHHHHHHHHHCCCHHHHHHHCHHHHHHHHCCCCCCCCCH DSLEQLNENADKFGGKIIGIEPGAGLMRDTSNAVKEYGLKLQLVEGSTAAMTAALKSAYD HHHHHHHCCHHHHCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHC RQEWIAVTIWEPSWMVQKYEVKYLKDPKGVFPPPQSYYWIGHKGFSEEYPHAREVMASVY CCCEEEEEEECCCHHHHHEEHEEECCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHH VPIADITTINGAVKDGKTMDQAVQDWIGSHADLIKRWENIKKK CCHHHEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCC >Mature Secondary Structure MKTLWKALCAAAVIGMSILPARAEEKTITLGTMAWEDLTPITGITKKVLEDAGYTVKVTE CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHHCCCCHHHHHHHHHHHCCCEEEEEE FSEWGIAYAALAKGDIQALTSQTDYVAQDYWDKNKNRLEKISPVSHGLYQGVAVPKYVPI CCCCCHHHHHHHCCHHHHHHCCHHHHHHHHHCCCHHHHHHHCHHHHHHHHCCCCCCCCCH DSLEQLNENADKFGGKIIGIEPGAGLMRDTSNAVKEYGLKLQLVEGSTAAMTAALKSAYD HHHHHHHCCHHHHCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHC RQEWIAVTIWEPSWMVQKYEVKYLKDPKGVFPPPQSYYWIGHKGFSEEYPHAREVMASVY CCCEEEEEEECCCHHHHHEEHEEECCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHH VPIADITTINGAVKDGKTMDQAVQDWIGSHADLIKRWENIKKK CCHHHEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-proline [Periplasm]; H2O [C]
Specific reaction: ATP + L-proline [Periplasm] + H2O = ADP + phosphate + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7622480; 8969502; 9384377 [H]