Definition Rhizobium etli CIAT 652 plasmid pC, complete sequence.
Accession NC_010997
Length 1,091,523

Click here to switch to the map view.

The map label for this gene is 190894863

Identifier: 190894863

GI number: 190894863

Start: 573701

End: 573991

Strand: Reverse

Name: 190894863

Synonym: RHECIAT_PC0000528

Alternate gene names: NA

Gene position: 573991-573701 (Counterclockwise)

Preceding gene: 190894868

Following gene: 190894862

Centisome position: 52.59

GC content: 58.42

Gene sequence:

>291_bases
ATGGAAGAGAAGACCAATATAATCAAAGACCTCAGCATCGAGGAACGCGAGGAAATCTTCGTCGATATCGCTCGCACGCT
GGAGGATACGGCGCGCGAGGCCCTCGTCGAGGGGAATATGCAATTTGCTGTGCTGTCGAACAACATGGCCGAAGCGATCC
GCGTCAACGCCGACGAACTCGCTCGGGACGATCCCGAGAATGCCGAGCGCGTGCTGCTCGAGGCGACGGCGATGATCTCG
CAGTTCGAGGCCGTGCACCCGTATCGCATGGTCAGTATGGCCGTTCACTGA

Upstream 100 bases:

>100_bases
TGTGTTCCGGCTTGAATCCGGACATCGGCGTTCCTAGCTCTCAGGCGATCGAGGCTCGATGAGCTCGATCAACGTCCCAC
GTCTTTTAGGAGTGAGTGAC

Downstream 100 bases:

>100_bases
TTGCCCCGCGCAAATCAATCGCCAGCCTGCGGAACTCTCACGGCTGGCGAAGGTTAATGGATCACAGCATCGACAGGTGA
TCCATGAACACTTCGAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MEEKTNIIKDLSIEEREEIFVDIARTLEDTAREALVEGNMQFAVLSNNMAEAIRVNADELARDDPENAERVLLEATAMIS
QFEAVHPYRMVSMAVH

Sequences:

>Translated_96_residues
MEEKTNIIKDLSIEEREEIFVDIARTLEDTAREALVEGNMQFAVLSNNMAEAIRVNADELARDDPENAERVLLEATAMIS
QFEAVHPYRMVSMAVH
>Mature_96_residues
MEEKTNIIKDLSIEEREEIFVDIARTLEDTAREALVEGNMQFAVLSNNMAEAIRVNADELARDDPENAERVLLEATAMIS
QFEAVHPYRMVSMAVH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10907; Mature: 10907

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEKTNIIKDLSIEEREEIFVDIARTLEDTAREALVEGNMQFAVLSNNMAEAIRVNADEL
CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCHHHH
ARDDPENAERVLLEATAMISQFEAVHPYRMVSMAVH
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
>Mature Secondary Structure
MEEKTNIIKDLSIEEREEIFVDIARTLEDTAREALVEGNMQFAVLSNNMAEAIRVNADEL
CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCHHHH
ARDDPENAERVLLEATAMISQFEAVHPYRMVSMAVH
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA