| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894784
Identifier: 190894784
GI number: 190894784
Start: 478799
End: 479206
Strand: Reverse
Name: 190894784
Synonym: RHECIAT_PC0000449
Alternate gene names: NA
Gene position: 479206-478799 (Counterclockwise)
Preceding gene: 190894785
Following gene: 190894782
Centisome position: 43.9
GC content: 60.78
Gene sequence:
>408_bases ATGCCGCGCCGCAAGACCAATGAGATGCCGACGCTTGACACCACCGGAGCAAAGATCGGTGAGCCGGTGCCGAAAGCCAT CATTGATGTCAACACCGCATCCGTCGGGGTCCCCCGTCAGCCTGAAGAAGACCTGCGCGCAGAATTGAGCGCCTTGCGCA GACAGCTGGAGACGCTCCAGCAACAGATCCTCGATGCAGGGCAATTGGCCAAGGACAGCGCCAGTCAGGCGATCCGTCAA ACCGAGACAGTTGTGAAACAATATCCGCTCTCGACAGTGGCGCTCATGGTTGCTGTCGTGGGTCTGCTGGCCCTTGCCTC ACGCCAGGTTCTGGCGCCGCGCCATCGCGAACCATCCGTCCTGCACGACCTCAGAGACTATATTGACCGGGCCCGCGGAT GGATCTGA
Upstream 100 bases:
>100_bases GAGGAAATATACGTCATCCGGCCTGACCGAAGCCTGCTGATCGCCGAGCGCCATTATCGACCGGTCTTTTCACTTGACGA TGACTAGGAGGAGATGTGAC
Downstream 100 bases:
>100_bases CAAGATTTCGGGATTGCCAGCATCCTGATTCTGCAAGACGCTTTGTCAAGCAGCAGGAGAAACAGGATGCTCGACCTCAT TATACGAAGCGCTTTCAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MPRRKTNEMPTLDTTGAKIGEPVPKAIIDVNTASVGVPRQPEEDLRAELSALRRQLETLQQQILDAGQLAKDSASQAIRQ TETVVKQYPLSTVALMVAVVGLLALASRQVLAPRHREPSVLHDLRDYIDRARGWI
Sequences:
>Translated_135_residues MPRRKTNEMPTLDTTGAKIGEPVPKAIIDVNTASVGVPRQPEEDLRAELSALRRQLETLQQQILDAGQLAKDSASQAIRQ TETVVKQYPLSTVALMVAVVGLLALASRQVLAPRHREPSVLHDLRDYIDRARGWI >Mature_134_residues PRRKTNEMPTLDTTGAKIGEPVPKAIIDVNTASVGVPRQPEEDLRAELSALRRQLETLQQQILDAGQLAKDSASQAIRQT ETVVKQYPLSTVALMVAVVGLLALASRQVLAPRHREPSVLHDLRDYIDRARGWI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14927; Mature: 14796
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRRKTNEMPTLDTTGAKIGEPVPKAIIDVNTASVGVPRQPEEDLRAELSALRRQLETLQ CCCCCCCCCCCCCCCCCHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH QQILDAGQLAKDSASQAIRQTETVVKQYPLSTVALMVAVVGLLALASRQVLAPRHREPSV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH LHDLRDYIDRARGWI HHHHHHHHHHHCCCC >Mature Secondary Structure PRRKTNEMPTLDTTGAKIGEPVPKAIIDVNTASVGVPRQPEEDLRAELSALRRQLETLQ CCCCCCCCCCCCCCCCHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH QQILDAGQLAKDSASQAIRQTETVVKQYPLSTVALMVAVVGLLALASRQVLAPRHREPSV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH LHDLRDYIDRARGWI HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA