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The map label for this gene is thuF [C]

Identifier: 190894737

GI number: 190894737

Start: 426816

End: 427802

Strand: Reverse

Name: thuF [C]

Synonym: RHECIAT_PC0000402

Alternate gene names: 190894737

Gene position: 427802-426816 (Counterclockwise)

Preceding gene: 190894738

Following gene: 190894736

Centisome position: 39.19

GC content: 59.17

Gene sequence:

>987_bases
ATGACTGAAATCGTAGTTTCGCAAGCAGTTGAACCAAGGATTTCCAGGCTCAGAGCCTCTACGGAGCTGCGATCCGAGCG
TGTTCGATCCGCCTGGATGTTCCTGGCGCCGACGCTGCTGATCCTGGCAATCGTCGCCGGCTGGCCGTTGTTCAGAACGA
TCTATTTCAGCCTTACGAATGCGTCGCTCAACGACCTCGGCAATGCGCGGTTCGTAGGCTTTTCCAATTATCTGTCGTGG
GTGACGCTGAAGAGCGGAAAGACTATCTATCGCGGGCTGCTTGCCGATCCGGTCTGGTGGAGAGCGGTTTGGAACACGGC
AAAGTTCACCCTCCTTTCGGTGGTGCTCGAGACCATACTCGGGCTGATCATCGCGCTGGTGCTGAACGCACGCTTCGTCG
GCCGTGGCGTTGTTCGGGCGGCAATCCTCATTCCCTGGGCGATCCCGACGATCGTGTCGGCCAAGATGTGGGCCTGGATG
CTCAACGACCAGTTCGGCATCCTGAACGACATCCTGCTCGGCTTCGGGCTTATCAGCGAGAAGATCGCCTGGACTGCCAA
CCCGGAAACGGCGATGACCGCCGTGCTGATCGTCGACGTCTGGAAGACGACGCCCTTCATGGCGCTGCTGATCCTTGCCG
GACTGCAGATGGTTCCGGGCGATATCTATGAGGCCGCCAAGATCGACGGCGTCAATCCGGTCAAGGTCTTCTGGCGTCTG
ACGCTGCCGCTGATCCGCCCGGCGATCATGGTTGCCGTGATCTTCCGGATGCTCGATGCGATGCGCATCTTCGATCTGAT
CTATGTGCTGACGCCCAACAATGCGCAGACCAAGACGATGTCGGTCATGGCGCGCGAAAACCTGTTCGACTTCGACAAGT
TCGCCTACGGCGCGACCGCCTCGACGGTGCTTTTCCTGATCATTGCCTCCGTCACCATCCTTTATATCTGGCTTGGCCGC
GTCAGGCTCGGCGGGGAGGAACGCTGA

Upstream 100 bases:

>100_bases
CCGACCTCACGACCCTCAAGGGCGACGCCTGGTAAGATTCCGGCCGGCGGCTGTGAAGCCGCCGGCCCGGTTTCGAACGA
GCGAACGGGAGAGGCGTTTC

Downstream 100 bases:

>100_bases
TGCTGCTGTCGATCACCAAGAATACGCTCTTCTACCTGCTCGTCACGATCATCGTCATCATCGCTGTCTTTCCGTTCTAC
TATGCGATCCTCACGAGCCT

Product: trehalosemaltose ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MTEIVVSQAVEPRISRLRASTELRSERVRSAWMFLAPTLLILAIVAGWPLFRTIYFSLTNASLNDLGNARFVGFSNYLSW
VTLKSGKTIYRGLLADPVWWRAVWNTAKFTLLSVVLETILGLIIALVLNARFVGRGVVRAAILIPWAIPTIVSAKMWAWM
LNDQFGILNDILLGFGLISEKIAWTANPETAMTAVLIVDVWKTTPFMALLILAGLQMVPGDIYEAAKIDGVNPVKVFWRL
TLPLIRPAIMVAVIFRMLDAMRIFDLIYVLTPNNAQTKTMSVMARENLFDFDKFAYGATASTVLFLIIASVTILYIWLGR
VRLGGEER

Sequences:

>Translated_328_residues
MTEIVVSQAVEPRISRLRASTELRSERVRSAWMFLAPTLLILAIVAGWPLFRTIYFSLTNASLNDLGNARFVGFSNYLSW
VTLKSGKTIYRGLLADPVWWRAVWNTAKFTLLSVVLETILGLIIALVLNARFVGRGVVRAAILIPWAIPTIVSAKMWAWM
LNDQFGILNDILLGFGLISEKIAWTANPETAMTAVLIVDVWKTTPFMALLILAGLQMVPGDIYEAAKIDGVNPVKVFWRL
TLPLIRPAIMVAVIFRMLDAMRIFDLIYVLTPNNAQTKTMSVMARENLFDFDKFAYGATASTVLFLIIASVTILYIWLGR
VRLGGEER
>Mature_327_residues
TEIVVSQAVEPRISRLRASTELRSERVRSAWMFLAPTLLILAIVAGWPLFRTIYFSLTNASLNDLGNARFVGFSNYLSWV
TLKSGKTIYRGLLADPVWWRAVWNTAKFTLLSVVLETILGLIIALVLNARFVGRGVVRAAILIPWAIPTIVSAKMWAWML
NDQFGILNDILLGFGLISEKIAWTANPETAMTAVLIVDVWKTTPFMALLILAGLQMVPGDIYEAAKIDGVNPVKVFWRLT
LPLIRPAIMVAVIFRMLDAMRIFDLIYVLTPNNAQTKTMSVMARENLFDFDKFAYGATASTVLFLIIASVTILYIWLGRV
RLGGEER

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=285, Percent_Identity=30.1754385964912, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1789861, Length=292, Percent_Identity=27.3972602739726, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1790465, Length=147, Percent_Identity=34.6938775510204, Blast_Score=95, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36745; Mature: 36614

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEIVVSQAVEPRISRLRASTELRSERVRSAWMFLAPTLLILAIVAGWPLFRTIYFSLTN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
ASLNDLGNARFVGFSNYLSWVTLKSGKTIYRGLLADPVWWRAVWNTAKFTLLSVVLETIL
CCHHHCCCCEEEEHHHHHHEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
GLIIALVLNARFVGRGVVRAAILIPWAIPTIVSAKMWAWMLNDQFGILNDILLGFGLISE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
KIAWTANPETAMTAVLIVDVWKTTPFMALLILAGLQMVPGDIYEAAKIDGVNPVKVFWRL
HHEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHH
TLPLIRPAIMVAVIFRMLDAMRIFDLIYVLTPNNAQTKTMSVMARENLFDFDKFAYGATA
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCHHHHHCCCHH
STVLFLIIASVTILYIWLGRVRLGGEER
HHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TEIVVSQAVEPRISRLRASTELRSERVRSAWMFLAPTLLILAIVAGWPLFRTIYFSLTN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
ASLNDLGNARFVGFSNYLSWVTLKSGKTIYRGLLADPVWWRAVWNTAKFTLLSVVLETIL
CCHHHCCCCEEEEHHHHHHEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
GLIIALVLNARFVGRGVVRAAILIPWAIPTIVSAKMWAWMLNDQFGILNDILLGFGLISE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
KIAWTANPETAMTAVLIVDVWKTTPFMALLILAGLQMVPGDIYEAAKIDGVNPVKVFWRL
HHEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHH
TLPLIRPAIMVAVIFRMLDAMRIFDLIYVLTPNNAQTKTMSVMARENLFDFDKFAYGATA
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCHHHHHCCCHH
STVLFLIIASVTILYIWLGRVRLGGEER
HHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]