Click here to switch to the map view.

The map label for this gene is yhbW [C]

Identifier: 190894724

GI number: 190894724

Start: 411174

End: 412256

Strand: Reverse

Name: yhbW [C]

Synonym: RHECIAT_PC0000389

Alternate gene names: 190894724

Gene position: 412256-411174 (Counterclockwise)

Preceding gene: 190894725

Following gene: 190894723

Centisome position: 37.77

GC content: 61.22

Gene sequence:

>1083_bases
ATGAAATTCGCAGTATCGCTGACCATGGAACGCTTCTCGCCCGACGTCCCGATGTCGACGGCCAAGAACAACCTTCTGGC
GCTCGCCCGCATGGCCGAAGAGGGTGACTTCGAGGCGCTGTGGACCGCCGAGCACCACACCATCGAATGCACGATTTCGC
CGAACCCGTTCCAGACGCTGGTGTGGCTGGCGCAGCATACGCAGAAGATTCGGCTCGGCACCTCGACTCTGGTGGCGCCC
TACTGGAGCCCGATCCGGCTGGCCGGTGAATCGGCGCTCTGCGACCATCTCACCAACGGCCGCCTGGAATTCGGGATCGC
CCGTGGTTCTTACCAGTACGAGTTCGACCGGATGGCTGGCGGCATGCCTCAGCAGGAAGGCGTCGCCTACATGAAGGAGA
TCGTGCCGGCGGTGAAGAAGCTCTGGGCCGGCGATTATGCCCATGATGGTCACTACTGGAATTTCCCGACTGCCACCTCG
GTGCCGAAGCCGCTGCAACAGCCGCATCCGCCGATTTGGGTTGCGGCGCGCGATCCAGGCACCTTCGACTGGGCGATCGC
CAACGGCGCCAGCATCCTCTCGACGCCGCTTTCGGCGCCGGCTGCGGAAATCCAGGTTCTGTCGGACAAGTTTCACAAGG
CGGTAGCCGATCATCCGGAAGTGCCACGCCCCCGCTTCATGATGCAGCGCCGCACCTGCGTCTACGACAAGCCGGATGGC
TGGGAGACAGCCGTCAAGCACAGCATGGATTACGGCCGTGCCTTCGAAAATCTGATGCAGAATATCGGCACTGTGCGCGA
AGGCTTTCCGGAGGCCGTGCCCTACGAGGCAGTGAAGGGCAAGGACAACTACAATCCGGACAATATCCGCAAGAACCTGA
TGTTCGGTACGCCCGACGAGGCGATCGAGAAGCTGCTGATGTTCGAAGCCGCCGGCGTAGATCAATATTGCCTGGGTCTC
ACCTTCAATCTGCCGTTCGAACTGCAGAAGCGCACGCTGGAGCTGTTCATCAGGGAAATCATGCCCTTTTTCGCGGCGCG
CGAGGAAGAGAAGGAACAGAAGCGCAAGGCAGCGGCGAACTGA

Upstream 100 bases:

>100_bases
GAAGAACGTCATCATCGATTATTCCGGGGCGATGCAGGACCCCTTCGTCATCCGCCTGAAGTGACGACACAAGAAACGAA
CCCGAAAGGGAGGGTAGCAG

Downstream 100 bases:

>100_bases
TCATGGGAGAGGCACAGCGCCATACCGTCGGAGACGTGACGCTCAACTACCGCATCGACGGTAGCGGCGATCCGCTCGTC
TGCATCCACGGCGTCGGATC

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MKFAVSLTMERFSPDVPMSTAKNNLLALARMAEEGDFEALWTAEHHTIECTISPNPFQTLVWLAQHTQKIRLGTSTLVAP
YWSPIRLAGESALCDHLTNGRLEFGIARGSYQYEFDRMAGGMPQQEGVAYMKEIVPAVKKLWAGDYAHDGHYWNFPTATS
VPKPLQQPHPPIWVAARDPGTFDWAIANGASILSTPLSAPAAEIQVLSDKFHKAVADHPEVPRPRFMMQRRTCVYDKPDG
WETAVKHSMDYGRAFENLMQNIGTVREGFPEAVPYEAVKGKDNYNPDNIRKNLMFGTPDEAIEKLLMFEAAGVDQYCLGL
TFNLPFELQKRTLELFIREIMPFFAAREEEKEQKRKAAAN

Sequences:

>Translated_360_residues
MKFAVSLTMERFSPDVPMSTAKNNLLALARMAEEGDFEALWTAEHHTIECTISPNPFQTLVWLAQHTQKIRLGTSTLVAP
YWSPIRLAGESALCDHLTNGRLEFGIARGSYQYEFDRMAGGMPQQEGVAYMKEIVPAVKKLWAGDYAHDGHYWNFPTATS
VPKPLQQPHPPIWVAARDPGTFDWAIANGASILSTPLSAPAAEIQVLSDKFHKAVADHPEVPRPRFMMQRRTCVYDKPDG
WETAVKHSMDYGRAFENLMQNIGTVREGFPEAVPYEAVKGKDNYNPDNIRKNLMFGTPDEAIEKLLMFEAAGVDQYCLGL
TFNLPFELQKRTLELFIREIMPFFAAREEEKEQKRKAAAN
>Mature_360_residues
MKFAVSLTMERFSPDVPMSTAKNNLLALARMAEEGDFEALWTAEHHTIECTISPNPFQTLVWLAQHTQKIRLGTSTLVAP
YWSPIRLAGESALCDHLTNGRLEFGIARGSYQYEFDRMAGGMPQQEGVAYMKEIVPAVKKLWAGDYAHDGHYWNFPTATS
VPKPLQQPHPPIWVAARDPGTFDWAIANGASILSTPLSAPAAEIQVLSDKFHKAVADHPEVPRPRFMMQRRTCVYDKPDG
WETAVKHSMDYGRAFENLMQNIGTVREGFPEAVPYEAVKGKDNYNPDNIRKNLMFGTPDEAIEKLLMFEAAGVDQYCLGL
TFNLPFELQKRTLELFIREIMPFFAAREEEKEQKRKAAAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial luciferase oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 40641; Mature: 40641

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFAVSLTMERFSPDVPMSTAKNNLLALARMAEEGDFEALWTAEHHTIECTISPNPFQTL
CEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEECCCHHHHH
VWLAQHTQKIRLGTSTLVAPYWSPIRLAGESALCDHLTNGRLEFGIARGSYQYEFDRMAG
HHHHHHHHHEECCCCEEECCCCCCCEECCCHHHHHHHCCCCEEEEEECCCCEEEHHHHCC
GMPQQEGVAYMKEIVPAVKKLWAGDYAHDGHYWNFPTATSVPKPLQQPHPPIWVAARDPG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCHHCCCCCCEEEEECCCC
TFDWAIANGASILSTPLSAPAAEIQVLSDKFHKAVADHPEVPRPRFMMQRRTCVYDKPDG
CEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCC
WETAVKHSMDYGRAFENLMQNIGTVREGFPEAVPYEAVKGKDNYNPDNIRKNLMFGTPDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCHH
AIEKLLMFEAAGVDQYCLGLTFNLPFELQKRTLELFIREIMPFFAAREEEKEQKRKAAAN
HHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKFAVSLTMERFSPDVPMSTAKNNLLALARMAEEGDFEALWTAEHHTIECTISPNPFQTL
CEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEECCCHHHHH
VWLAQHTQKIRLGTSTLVAPYWSPIRLAGESALCDHLTNGRLEFGIARGSYQYEFDRMAG
HHHHHHHHHEECCCCEEECCCCCCCEECCCHHHHHHHCCCCEEEEEECCCCEEEHHHHCC
GMPQQEGVAYMKEIVPAVKKLWAGDYAHDGHYWNFPTATSVPKPLQQPHPPIWVAARDPG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCHHCCCCCCEEEEECCCC
TFDWAIANGASILSTPLSAPAAEIQVLSDKFHKAVADHPEVPRPRFMMQRRTCVYDKPDG
CEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCC
WETAVKHSMDYGRAFENLMQNIGTVREGFPEAVPYEAVKGKDNYNPDNIRKNLMFGTPDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCHH
AIEKLLMFEAAGVDQYCLGLTFNLPFELQKRTLELFIREIMPFFAAREEEKEQKRKAAAN
HHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424; 8796346 [H]