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The map label for this gene is yecS [C]

Identifier: 190894714

GI number: 190894714

Start: 402528

End: 403187

Strand: Reverse

Name: yecS [C]

Synonym: RHECIAT_PC0000379

Alternate gene names: 190894714

Gene position: 403187-402528 (Counterclockwise)

Preceding gene: 190894715

Following gene: 190894713

Centisome position: 36.94

GC content: 64.85

Gene sequence:

>660_bases
ATGTCGGTATGGTCCGGCTATCTGACACTGATCCTTGAGGGCGCCCTGGTGACGCTCCAGCTGACGGTCATGGGGTCCGC
GCTGGCGCTGGTCATGGCCTTCCTGGCGGGCCTCGGCCGCCTTTCACGCTTCTTTGCCGTGCGGGCTCTGGCGACGGCCT
ATATCGAATTCTTCCGCGGCACCTCGATCTTCGTGCAGCTCTTCTGGGTCTATTTCGTGCTGCCTTTTGCGGGGGTGACG
CTGACGCCGCTGCAGGCGGGCGTGCTAGCGCTCGGCCTGAATGTCGGCGCCTATGGCGCGGAGGTGGTGCGCGGCGCCGT
CAAGGCCGTCGGGCGCGAACAATCGGAAGCTTGTGTTGCGCTCAACCTGTCACGATATCAGCGTATGCGCCACGTCATCC
TGCCGCAGGCGCTGCCGCTGATGCTGCCGACCTTCTGCAACAATGCGATCGAGCTCCTGAAGGGCACGGCCGTCGTTTCG
CTGATCTCGCTGACGGATATGACCTTCCAGGCGCAGGTGGTGCGGGCGCAGACCGGCAATACGCTGGTGCCCTTCGCGAC
CATCCTCATCCTCTACTTCCTCATGGCCCTGGCGATTTCGGCGGCGATGCGCCGGCTGGAGCGGCGGATGGCGCGCGGTG
TCGACGGCATAAGGACCTGA

Upstream 100 bases:

>100_bases
CAAGCTCTGCGCCGCGGCGAAATAATCGAGGCGAGCAGCCGGCCATGCCATGGGCGTGGCCGGCTTGTCGCGAAACAATC
TCCAAAGAAGTGAGTTGCCG

Downstream 100 bases:

>100_bases
TCGGATGGAATGGGATTGGGATTTCGTCTGGCAGATCATGCCGACCCTTCTCGAAGGGTTCAAGATCACCATTCTCGCCA
CCGTCCTCGGCGCTGCGGTC

Product: putative amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MSVWSGYLTLILEGALVTLQLTVMGSALALVMAFLAGLGRLSRFFAVRALATAYIEFFRGTSIFVQLFWVYFVLPFAGVT
LTPLQAGVLALGLNVGAYGAEVVRGAVKAVGREQSEACVALNLSRYQRMRHVILPQALPLMLPTFCNNAIELLKGTAVVS
LISLTDMTFQAQVVRAQTGNTLVPFATILILYFLMALAISAAMRRLERRMARGVDGIRT

Sequences:

>Translated_219_residues
MSVWSGYLTLILEGALVTLQLTVMGSALALVMAFLAGLGRLSRFFAVRALATAYIEFFRGTSIFVQLFWVYFVLPFAGVT
LTPLQAGVLALGLNVGAYGAEVVRGAVKAVGREQSEACVALNLSRYQRMRHVILPQALPLMLPTFCNNAIELLKGTAVVS
LISLTDMTFQAQVVRAQTGNTLVPFATILILYFLMALAISAAMRRLERRMARGVDGIRT
>Mature_218_residues
SVWSGYLTLILEGALVTLQLTVMGSALALVMAFLAGLGRLSRFFAVRALATAYIEFFRGTSIFVQLFWVYFVLPFAGVTL
TPLQAGVLALGLNVGAYGAEVVRGAVKAVGREQSEACVALNLSRYQRMRHVILPQALPLMLPTFCNNAIELLKGTAVVSL
ISLTDMTFQAQVVRAQTGNTLVPFATILILYFLMALAISAAMRRLERRMARGVDGIRT

Specific function: Probably part of the binding-protein-dependent transport system y4tEFGH for an amino acid. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=205, Percent_Identity=35.1219512195122, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1787030, Length=211, Percent_Identity=37.914691943128, Blast_Score=133, Evalue=9e-33,
Organism=Escherichia coli, GI1786873, Length=214, Percent_Identity=29.9065420560748, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI87082239, Length=206, Percent_Identity=33.9805825242718, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI1788646, Length=222, Percent_Identity=30.6306306306306, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1786874, Length=219, Percent_Identity=29.6803652968037, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1788645, Length=220, Percent_Identity=29.0909090909091, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787086, Length=214, Percent_Identity=26.6355140186916, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI48994930, Length=137, Percent_Identity=32.8467153284672, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787087, Length=216, Percent_Identity=28.7037037037037, Blast_Score=68, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515
- InterPro:   IPR014342 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 23794; Mature: 23663

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVWSGYLTLILEGALVTLQLTVMGSALALVMAFLAGLGRLSRFFAVRALATAYIEFFRG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TSIFVQLFWVYFVLPFAGVTLTPLQAGVLALGLNVGAYGAEVVRGAVKAVGREQSEACVA
HHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHH
LNLSRYQRMRHVILPQALPLMLPTFCNNAIELLKGTAVVSLISLTDMTFQAQVVRAQTGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TLVPFATILILYFLMALAISAAMRRLERRMARGVDGIRT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SVWSGYLTLILEGALVTLQLTVMGSALALVMAFLAGLGRLSRFFAVRALATAYIEFFRG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TSIFVQLFWVYFVLPFAGVTLTPLQAGVLALGLNVGAYGAEVVRGAVKAVGREQSEACVA
HHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHH
LNLSRYQRMRHVILPQALPLMLPTFCNNAIELLKGTAVVSLISLTDMTFQAQVVRAQTGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TLVPFATILILYFLMALAISAAMRRLERRMARGVDGIRT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]