| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is kch [H]
Identifier: 190894692
GI number: 190894692
Start: 381171
End: 382226
Strand: Reverse
Name: kch [H]
Synonym: RHECIAT_PC0000355
Alternate gene names: 190894692
Gene position: 382226-381171 (Counterclockwise)
Preceding gene: 190894696
Following gene: 190894691
Centisome position: 35.02
GC content: 59.28
Gene sequence:
>1056_bases TTGCCATTTATCGCTTCATTTCTGCGGCGTATATATCTTTCGCTGGGCGAGTTGGCCTGGTCAGCGCTTTTTCTTATCCT CGTTCTTCATCTGGTCTTGTCTTACCTGCTCTTTATGCTGGCAGGCGAGGGCGATCTCGTCGGCAGGCCGGTCGACTTCG TTTATTATTATATGGTCACCGCAACGACTGTCGGCTATGGCGATCTTTCTCCAAAGTCGGCGCCCGGCCGGCTCATCACC GTGCTGATCGTTCTTCCCGGTGGCATTGCCATCTTTACTGCAGTTCTTGGCAAGTTGTTGACAGCTATCGGTACGATTTG GAGGAATCGCATGCGCGGATTGGGTGATTACAGCGAACGCGCCGGCCATATTATCGTTGTAGGCTGGCAAGAGGGGCAGA CACACCAGACACTGCGGCTGCTGCATTCCGAACGCCATGCCAACGAGCCGATGAGCGTTCTGGTCGCCAAGGACCTGCCG GAAAATCCTGCCACCGACTACGCCGACTATATCAGAAGCGATCGGCTTGCCGATGCCGACGCCTTGACTCGGGCCGGCAT AGCCCAGGCGCGCGCGATCATTGCGCGCGGCGCCAATGACGACGAAACGCTGGCCGCAGTCCTGATTGCCGAGGATCACG CGCCCAATGCCCATATCGTTGCTTATTTCGACGATGACCGCACGGCGCAGATGGTCAAACAGCTGCGGCCGCGCGTCGAG GCGGTGGGATCGCTCGCCGAGGAGCTCCTGTCGCGTTCAGCGCGTGATCCCGGCTCCTCGGAAATCGCCGCACGGCTGCT GTCGGCCGCCTCCACCGACACGGCCTTTTCCCTGCCGGTGCCGCCTTTGCAAACGCCACTGCTCTATGGCGAGGTATTTT TAAGGCTCAAGCGCCGGTACAACGTGACACTGGTGGGCATGCTGAGCGAGGGCATGACCGATCTGAATTGCCGAGACGAG ACGCCGATGCGCGGCGGCGAGACTCTTTACTACATCAGCGGAATGCGGCTAGATCCCGCCGCCATCGCCTGGGCTAGAAT GGGAGACGAAACATGA
Upstream 100 bases:
>100_bases TTAGAGCGTCAAAAATATCTGGGTAGTCGGTTTACAACTTAAAGGTCTGGCGCGCGAAATAAATTTCGATAGGGTGCACG TTAGCAACCGGGGGAATCGC
Downstream 100 bases:
>100_bases TCGGCTGGTTCGGTGGAAACAAGGACGAAAAGCCCCTGCCAAAAGAACTCGGTCCCTTGAGCGTGGCCATCGGTGGGGCG TTCGAGATCGATTTCCTCTC
Product: putative cation transporter (potassium channel) protein
Products: K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MPFIASFLRRIYLSLGELAWSALFLILVLHLVLSYLLFMLAGEGDLVGRPVDFVYYYMVTATTVGYGDLSPKSAPGRLIT VLIVLPGGIAIFTAVLGKLLTAIGTIWRNRMRGLGDYSERAGHIIVVGWQEGQTHQTLRLLHSERHANEPMSVLVAKDLP ENPATDYADYIRSDRLADADALTRAGIAQARAIIARGANDDETLAAVLIAEDHAPNAHIVAYFDDDRTAQMVKQLRPRVE AVGSLAEELLSRSARDPGSSEIAARLLSAASTDTAFSLPVPPLQTPLLYGEVFLRLKRRYNVTLVGMLSEGMTDLNCRDE TPMRGGETLYYISGMRLDPAAIAWARMGDET
Sequences:
>Translated_351_residues MPFIASFLRRIYLSLGELAWSALFLILVLHLVLSYLLFMLAGEGDLVGRPVDFVYYYMVTATTVGYGDLSPKSAPGRLIT VLIVLPGGIAIFTAVLGKLLTAIGTIWRNRMRGLGDYSERAGHIIVVGWQEGQTHQTLRLLHSERHANEPMSVLVAKDLP ENPATDYADYIRSDRLADADALTRAGIAQARAIIARGANDDETLAAVLIAEDHAPNAHIVAYFDDDRTAQMVKQLRPRVE AVGSLAEELLSRSARDPGSSEIAARLLSAASTDTAFSLPVPPLQTPLLYGEVFLRLKRRYNVTLVGMLSEGMTDLNCRDE TPMRGGETLYYISGMRLDPAAIAWARMGDET >Mature_350_residues PFIASFLRRIYLSLGELAWSALFLILVLHLVLSYLLFMLAGEGDLVGRPVDFVYYYMVTATTVGYGDLSPKSAPGRLITV LIVLPGGIAIFTAVLGKLLTAIGTIWRNRMRGLGDYSERAGHIIVVGWQEGQTHQTLRLLHSERHANEPMSVLVAKDLPE NPATDYADYIRSDRLADADALTRAGIAQARAIIARGANDDETLAAVLIAEDHAPNAHIVAYFDDDRTAQMVKQLRPRVEA VGSLAEELLSRSARDPGSSEIAARLLSAASTDTAFSLPVPPLQTPLLYGEVFLRLKRRYNVTLVGMLSEGMTDLNCRDET PMRGGETLYYISGMRLDPAAIAWARMGDET
Specific function: May play a role in the defense against osmotic shock [H]
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1787503, Length=196, Percent_Identity=30.1020408163265, Blast_Score=75, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013099 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF07885 Ion_trans_2; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 38461; Mature: 38330
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFIASFLRRIYLSLGELAWSALFLILVLHLVLSYLLFMLAGEGDLVGRPVDFVYYYMVT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH ATTVGYGDLSPKSAPGRLITVLIVLPGGIAIFTAVLGKLLTAIGTIWRNRMRGLGDYSER HHHCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHC AGHIIVVGWQEGQTHQTLRLLHSERHANEPMSVLVAKDLPENPATDYADYIRSDRLADAD CCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCHH ALTRAGIAQARAIIARGANDDETLAAVLIAEDHAPNAHIVAYFDDDRTAQMVKQLRPRVE HHHHHHHHHHHHHHHCCCCCCHHEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHH AVGSLAEELLSRSARDPGSSEIAARLLSAASTDTAFSLPVPPLQTPLLYGEVFLRLKRRY HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHC NVTLVGMLSEGMTDLNCRDETPMRGGETLYYISGMRLDPAAIAWARMGDET CEEEEEEHHCCCCCCCCCCCCCCCCCCEEEEEECCEECHHHHHHHHCCCCC >Mature Secondary Structure PFIASFLRRIYLSLGELAWSALFLILVLHLVLSYLLFMLAGEGDLVGRPVDFVYYYMVT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH ATTVGYGDLSPKSAPGRLITVLIVLPGGIAIFTAVLGKLLTAIGTIWRNRMRGLGDYSER HHHCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHC AGHIIVVGWQEGQTHQTLRLLHSERHANEPMSVLVAKDLPENPATDYADYIRSDRLADAD CCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCHH ALTRAGIAQARAIIARGANDDETLAAVLIAEDHAPNAHIVAYFDDDRTAQMVKQLRPRVE HHHHHHHHHHHHHHHCCCCCCHHEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHH AVGSLAEELLSRSARDPGSSEIAARLLSAASTDTAFSLPVPPLQTPLLYGEVFLRLKRRY HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHC NVTLVGMLSEGMTDLNCRDETPMRGGETLYYISGMRLDPAAIAWARMGDET CEEEEEEHHCCCCCCCCCCCCCCCCCCEEEEEECCEECHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8170937; 9097039; 9278503 [H]