| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
Click here to switch to the map view.
The map label for this gene is 190894674
Identifier: 190894674
GI number: 190894674
Start: 363394
End: 363987
Strand: Reverse
Name: 190894674
Synonym: RHECIAT_PC0000337
Alternate gene names: NA
Gene position: 363987-363394 (Counterclockwise)
Preceding gene: 190894675
Following gene: 190894673
Centisome position: 33.35
GC content: 61.95
Gene sequence:
>594_bases ATGATGACCTATTTCCGTGGTGTTCGGAGCCCTCTTCATTTTCAATCGGGGACGGGGCGCGTCTGCATGGACTGGATCAA TCGCTATATCGATCAGCCGCTACTGCACGGTGCGGCGGGCTTGCTGCGGAGTTGGCACATCCGCACGCGGCAGCCGCCGG AACTGTTGGAGCCGACGTGGAATCTCGTCGTGCTTTCTTTTCTCCTTGTCGCCAGCGGGCAGGTGATGGCCGGAAGGCCT TTCGCGCTCAGCCTCGCCGCGCTGGTCATGCTGGCCCTGCCATCGGCCAGAAAGCTGTTTTCGGCGATAAAGGTGGGAGG AAGCGCCTATGGCGCCCGGGAGTACAAGTCACTGAGGGCGCGTGCCGTGGCCAAGCGTGAGGCGGAGTGGTCGGTGCGGA TCATTGTTCTTTTCTCATCGGCCTGCCTTCCGTTCATCGCTCGCATCGACGATCCCGTGGGCGCCTGTTTCATGTTGGGG GCAAGCGTCTGGTTCGTGCTGACCGGGCCGCTGAAGACCTATCTCGATGCGGCTGAACCTCCCGAGCCGACCGAAGGCGA CCGGACCTACAGCGGCGTCTTTCATTTCGGCTGA
Upstream 100 bases:
>100_bases CCGGTCGACACGACCGGCGATAGGCCCTATCGGTCGTTCGAAGGCCGGTTTCCTGTGAGCGAAGCACAGCTTCGGCTGAT ATTGCCGGCGCTCTGCCACG
Downstream 100 bases:
>100_bases ACGAAAGCTGTCTGCCGAGCATGATAGGCAGGGAACTAAACCGGGCGGTCTCCGTTATCTGAGCAGCAACGTAAAAGGAG ATTGCGATGCTTTACTACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MMTYFRGVRSPLHFQSGTGRVCMDWINRYIDQPLLHGAAGLLRSWHIRTRQPPELLEPTWNLVVLSFLLVASGQVMAGRP FALSLAALVMLALPSARKLFSAIKVGGSAYGAREYKSLRARAVAKREAEWSVRIIVLFSSACLPFIARIDDPVGACFMLG ASVWFVLTGPLKTYLDAAEPPEPTEGDRTYSGVFHFG
Sequences:
>Translated_197_residues MMTYFRGVRSPLHFQSGTGRVCMDWINRYIDQPLLHGAAGLLRSWHIRTRQPPELLEPTWNLVVLSFLLVASGQVMAGRP FALSLAALVMLALPSARKLFSAIKVGGSAYGAREYKSLRARAVAKREAEWSVRIIVLFSSACLPFIARIDDPVGACFMLG ASVWFVLTGPLKTYLDAAEPPEPTEGDRTYSGVFHFG >Mature_197_residues MMTYFRGVRSPLHFQSGTGRVCMDWINRYIDQPLLHGAAGLLRSWHIRTRQPPELLEPTWNLVVLSFLLVASGQVMAGRP FALSLAALVMLALPSARKLFSAIKVGGSAYGAREYKSLRARAVAKREAEWSVRIIVLFSSACLPFIARIDDPVGACFMLG ASVWFVLTGPLKTYLDAAEPPEPTEGDRTYSGVFHFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21759; Mature: 21759
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTYFRGVRSPLHFQSGTGRVCMDWINRYIDQPLLHGAAGLLRSWHIRTRQPPELLEPTW CCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHCCHH NLVVLSFLLVASGQVMAGRPFALSLAALVMLALPSARKLFSAIKVGGSAYGAREYKSLRA HHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHH RAVAKREAEWSVRIIVLFSSACLPFIARIDDPVGACFMLGASVWFVLTGPLKTYLDAAEP HHHHHHCCCCEEEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHEEEECHHHHHHCCCCC PEPTEGDRTYSGVFHFG CCCCCCCCEECCEEECC >Mature Secondary Structure MMTYFRGVRSPLHFQSGTGRVCMDWINRYIDQPLLHGAAGLLRSWHIRTRQPPELLEPTW CCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHCCHH NLVVLSFLLVASGQVMAGRPFALSLAALVMLALPSARKLFSAIKVGGSAYGAREYKSLRA HHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHH RAVAKREAEWSVRIIVLFSSACLPFIARIDDPVGACFMLGASVWFVLTGPLKTYLDAAEP HHHHHHCCCCEEEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHEEEECHHHHHHCCCCC PEPTEGDRTYSGVFHFG CCCCCCCCEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA