Definition Rhizobium etli CIAT 652 plasmid pC, complete sequence.
Accession NC_010997
Length 1,091,523

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The map label for this gene is 190894630

Identifier: 190894630

GI number: 190894630

Start: 315193

End: 316323

Strand: Reverse

Name: 190894630

Synonym: RHECIAT_PC0000293

Alternate gene names: NA

Gene position: 316323-315193 (Counterclockwise)

Preceding gene: 190894631

Following gene: 190894629

Centisome position: 28.98

GC content: 62.07

Gene sequence:

>1131_bases
ATGAAGTTCGTCTTTTATACCCATTCGCTGATTTCCGACTGGAATCATGGCAACGCACATTTCCTTCGCGGCGTCATGCG
GGATCTCCAGCGGCGCGGTCACGAAACGCTGGCATTGGAGCCGGAAGACGCCTGGAGCCGCACCAATCTCGTCAGCGATC
AAGGGCCGGCCGCCGTCGAGCGTTTTCATCAGGTCTTTCCGCAGCATCGCTCGGATTTCTACGGCGAGGCTTTCGACCAC
GAGGCGGCACTTGGCGATGCCGATGTCGTCATCGTGCACGAGTGGACGGCGCCGCGACTGGTCGAGAGCCTCGGGCGCAT
CCGGCGCAAAGGCGCTGGCTTCACCCTGCTCTTCCACGATACGCATCACCGGGCCGTCTCGGCCGAAGGGGACATCGCGT
CGCTCATGCTTGACGACTACGACGGGGTGCTGGCCTTCGGGCAGACCTTGCGTGAGCGCTATCTTCGTGCAGGCTGGGGA
AAGTCCGTCTTCACCTGGCACGAGGCAGCGGACGACGCGCTGTTTCGGCCGTTGCCGGATGTCGAGAAGTCAGGAGACCT
CATCTGGATCGGCAATTGGGGCGATGACGAGCGATCGGCTGAGATTGCCGAGTTCCTGATCCGGCCCGCCAGAGATCTGG
CGCTGAAGACGATGGTTCGCGGCGTTCGCTACCCTGACCATGCGCTGGATGAACTTCGTAACGCTGGCATCGCTTATGGC
GGCTGGATCGCCAACGCCGATGTTCCGGCCGCCTTTGCTCGCCACAAAGTGACGGTACACATCCCGCGGCGACCTTATGT
CGAGCACCTGCCCGGTATTCCGACGATCAGGGTCTTCGAGGCACTAGCCTGCGGCATACCCCTGATCTCGGCACCTTGGG
CTGATGTCGAGCATCTCTTCACCCCAGGCCGGGACTATCTGCCCGTCGGCAATGGCGAGGAGATGAAGAAGAGCCTGCGT
GCCGTCCTCTTCGATACAGATCTCGCCGTGAGCCTCGCTGCAGCCGGTCTTGCGACCATCAAGGCGCGTCACACCTGCCG
GCACCGCGTTGATGAGCTGCTGGAAATTCTGGCGAACTGCGGCACGAGCAAGGTCACTGCGAAGCTTCAGCCATGGGAGG
CGGCGGAATGA

Upstream 100 bases:

>100_bases
TGCGATCCGAGCGCTTCAGTCTCGACGCTCAAGCGAAGGCAATGTGCGGAATTTACTCCGGCATGTTTGGCCGCCCCTTT
TCAACAGCAGCGGAGTGATC

Downstream 100 bases:

>100_bases
AAATCGCATTTTATGGTTCGAGCCTCGTCTCTGCCTATTGGAATGGTGCCGCCACTTACTATCGCGGCTTGCTGCGGGCG
CTCTCGGGGAAAGGCTATGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MKFVFYTHSLISDWNHGNAHFLRGVMRDLQRRGHETLALEPEDAWSRTNLVSDQGPAAVERFHQVFPQHRSDFYGEAFDH
EAALGDADVVIVHEWTAPRLVESLGRIRRKGAGFTLLFHDTHHRAVSAEGDIASLMLDDYDGVLAFGQTLRERYLRAGWG
KSVFTWHEAADDALFRPLPDVEKSGDLIWIGNWGDDERSAEIAEFLIRPARDLALKTMVRGVRYPDHALDELRNAGIAYG
GWIANADVPAAFARHKVTVHIPRRPYVEHLPGIPTIRVFEALACGIPLISAPWADVEHLFTPGRDYLPVGNGEEMKKSLR
AVLFDTDLAVSLAAAGLATIKARHTCRHRVDELLEILANCGTSKVTAKLQPWEAAE

Sequences:

>Translated_376_residues
MKFVFYTHSLISDWNHGNAHFLRGVMRDLQRRGHETLALEPEDAWSRTNLVSDQGPAAVERFHQVFPQHRSDFYGEAFDH
EAALGDADVVIVHEWTAPRLVESLGRIRRKGAGFTLLFHDTHHRAVSAEGDIASLMLDDYDGVLAFGQTLRERYLRAGWG
KSVFTWHEAADDALFRPLPDVEKSGDLIWIGNWGDDERSAEIAEFLIRPARDLALKTMVRGVRYPDHALDELRNAGIAYG
GWIANADVPAAFARHKVTVHIPRRPYVEHLPGIPTIRVFEALACGIPLISAPWADVEHLFTPGRDYLPVGNGEEMKKSLR
AVLFDTDLAVSLAAAGLATIKARHTCRHRVDELLEILANCGTSKVTAKLQPWEAAE
>Mature_376_residues
MKFVFYTHSLISDWNHGNAHFLRGVMRDLQRRGHETLALEPEDAWSRTNLVSDQGPAAVERFHQVFPQHRSDFYGEAFDH
EAALGDADVVIVHEWTAPRLVESLGRIRRKGAGFTLLFHDTHHRAVSAEGDIASLMLDDYDGVLAFGQTLRERYLRAGWG
KSVFTWHEAADDALFRPLPDVEKSGDLIWIGNWGDDERSAEIAEFLIRPARDLALKTMVRGVRYPDHALDELRNAGIAYG
GWIANADVPAAFARHKVTVHIPRRPYVEHLPGIPTIRVFEALACGIPLISAPWADVEHLFTPGRDYLPVGNGEEMKKSLR
AVLFDTDLAVSLAAAGLATIKARHTCRHRVDELLEILANCGTSKVTAKLQPWEAAE

Specific function: Unknown

COG id: COG4641

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42084; Mature: 42084

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFVFYTHSLISDWNHGNAHFLRGVMRDLQRRGHETLALEPEDAWSRTNLVSDQGPAAVE
CEEEEEEHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCCCCHHHH
RFHQVFPQHRSDFYGEAFDHEAALGDADVVIVHEWTAPRLVESLGRIRRKGAGFTLLFHD
HHHHHHHHHHHCCCCCCCCCHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEC
THHRAVSAEGDIASLMLDDYDGVLAFGQTLRERYLRAGWGKSVFTWHEAADDALFRPLPD
CCCCEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHCCHHHCCCCC
VEKSGDLIWIGNWGDDERSAEIAEFLIRPARDLALKTMVRGVRYPDHALDELRNAGIAYG
CCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEC
GWIANADVPAAFARHKVTVHIPRRPYVEHLPGIPTIRVFEALACGIPLISAPWADVEHLF
CEECCCCCCHHHHHCEEEEEECCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHH
TPGRDYLPVGNGEEMKKSLRAVLFDTDLAVSLAAAGLATIKARHTCRHRVDELLEILANC
CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GTSKVTAKLQPWEAAE
CCCCEEEEECCCCCCC
>Mature Secondary Structure
MKFVFYTHSLISDWNHGNAHFLRGVMRDLQRRGHETLALEPEDAWSRTNLVSDQGPAAVE
CEEEEEEHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCCCCHHHH
RFHQVFPQHRSDFYGEAFDHEAALGDADVVIVHEWTAPRLVESLGRIRRKGAGFTLLFHD
HHHHHHHHHHHCCCCCCCCCHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEC
THHRAVSAEGDIASLMLDDYDGVLAFGQTLRERYLRAGWGKSVFTWHEAADDALFRPLPD
CCCCEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHCCHHHCCCCC
VEKSGDLIWIGNWGDDERSAEIAEFLIRPARDLALKTMVRGVRYPDHALDELRNAGIAYG
CCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEC
GWIANADVPAAFARHKVTVHIPRRPYVEHLPGIPTIRVFEALACGIPLISAPWADVEHLF
CEECCCCCCHHHHHCEEEEEECCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHH
TPGRDYLPVGNGEEMKKSLRAVLFDTDLAVSLAAAGLATIKARHTCRHRVDELLEILANC
CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GTSKVTAKLQPWEAAE
CCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA