| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894630
Identifier: 190894630
GI number: 190894630
Start: 315193
End: 316323
Strand: Reverse
Name: 190894630
Synonym: RHECIAT_PC0000293
Alternate gene names: NA
Gene position: 316323-315193 (Counterclockwise)
Preceding gene: 190894631
Following gene: 190894629
Centisome position: 28.98
GC content: 62.07
Gene sequence:
>1131_bases ATGAAGTTCGTCTTTTATACCCATTCGCTGATTTCCGACTGGAATCATGGCAACGCACATTTCCTTCGCGGCGTCATGCG GGATCTCCAGCGGCGCGGTCACGAAACGCTGGCATTGGAGCCGGAAGACGCCTGGAGCCGCACCAATCTCGTCAGCGATC AAGGGCCGGCCGCCGTCGAGCGTTTTCATCAGGTCTTTCCGCAGCATCGCTCGGATTTCTACGGCGAGGCTTTCGACCAC GAGGCGGCACTTGGCGATGCCGATGTCGTCATCGTGCACGAGTGGACGGCGCCGCGACTGGTCGAGAGCCTCGGGCGCAT CCGGCGCAAAGGCGCTGGCTTCACCCTGCTCTTCCACGATACGCATCACCGGGCCGTCTCGGCCGAAGGGGACATCGCGT CGCTCATGCTTGACGACTACGACGGGGTGCTGGCCTTCGGGCAGACCTTGCGTGAGCGCTATCTTCGTGCAGGCTGGGGA AAGTCCGTCTTCACCTGGCACGAGGCAGCGGACGACGCGCTGTTTCGGCCGTTGCCGGATGTCGAGAAGTCAGGAGACCT CATCTGGATCGGCAATTGGGGCGATGACGAGCGATCGGCTGAGATTGCCGAGTTCCTGATCCGGCCCGCCAGAGATCTGG CGCTGAAGACGATGGTTCGCGGCGTTCGCTACCCTGACCATGCGCTGGATGAACTTCGTAACGCTGGCATCGCTTATGGC GGCTGGATCGCCAACGCCGATGTTCCGGCCGCCTTTGCTCGCCACAAAGTGACGGTACACATCCCGCGGCGACCTTATGT CGAGCACCTGCCCGGTATTCCGACGATCAGGGTCTTCGAGGCACTAGCCTGCGGCATACCCCTGATCTCGGCACCTTGGG CTGATGTCGAGCATCTCTTCACCCCAGGCCGGGACTATCTGCCCGTCGGCAATGGCGAGGAGATGAAGAAGAGCCTGCGT GCCGTCCTCTTCGATACAGATCTCGCCGTGAGCCTCGCTGCAGCCGGTCTTGCGACCATCAAGGCGCGTCACACCTGCCG GCACCGCGTTGATGAGCTGCTGGAAATTCTGGCGAACTGCGGCACGAGCAAGGTCACTGCGAAGCTTCAGCCATGGGAGG CGGCGGAATGA
Upstream 100 bases:
>100_bases TGCGATCCGAGCGCTTCAGTCTCGACGCTCAAGCGAAGGCAATGTGCGGAATTTACTCCGGCATGTTTGGCCGCCCCTTT TCAACAGCAGCGGAGTGATC
Downstream 100 bases:
>100_bases AAATCGCATTTTATGGTTCGAGCCTCGTCTCTGCCTATTGGAATGGTGCCGCCACTTACTATCGCGGCTTGCTGCGGGCG CTCTCGGGGAAAGGCTATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MKFVFYTHSLISDWNHGNAHFLRGVMRDLQRRGHETLALEPEDAWSRTNLVSDQGPAAVERFHQVFPQHRSDFYGEAFDH EAALGDADVVIVHEWTAPRLVESLGRIRRKGAGFTLLFHDTHHRAVSAEGDIASLMLDDYDGVLAFGQTLRERYLRAGWG KSVFTWHEAADDALFRPLPDVEKSGDLIWIGNWGDDERSAEIAEFLIRPARDLALKTMVRGVRYPDHALDELRNAGIAYG GWIANADVPAAFARHKVTVHIPRRPYVEHLPGIPTIRVFEALACGIPLISAPWADVEHLFTPGRDYLPVGNGEEMKKSLR AVLFDTDLAVSLAAAGLATIKARHTCRHRVDELLEILANCGTSKVTAKLQPWEAAE
Sequences:
>Translated_376_residues MKFVFYTHSLISDWNHGNAHFLRGVMRDLQRRGHETLALEPEDAWSRTNLVSDQGPAAVERFHQVFPQHRSDFYGEAFDH EAALGDADVVIVHEWTAPRLVESLGRIRRKGAGFTLLFHDTHHRAVSAEGDIASLMLDDYDGVLAFGQTLRERYLRAGWG KSVFTWHEAADDALFRPLPDVEKSGDLIWIGNWGDDERSAEIAEFLIRPARDLALKTMVRGVRYPDHALDELRNAGIAYG GWIANADVPAAFARHKVTVHIPRRPYVEHLPGIPTIRVFEALACGIPLISAPWADVEHLFTPGRDYLPVGNGEEMKKSLR AVLFDTDLAVSLAAAGLATIKARHTCRHRVDELLEILANCGTSKVTAKLQPWEAAE >Mature_376_residues MKFVFYTHSLISDWNHGNAHFLRGVMRDLQRRGHETLALEPEDAWSRTNLVSDQGPAAVERFHQVFPQHRSDFYGEAFDH EAALGDADVVIVHEWTAPRLVESLGRIRRKGAGFTLLFHDTHHRAVSAEGDIASLMLDDYDGVLAFGQTLRERYLRAGWG KSVFTWHEAADDALFRPLPDVEKSGDLIWIGNWGDDERSAEIAEFLIRPARDLALKTMVRGVRYPDHALDELRNAGIAYG GWIANADVPAAFARHKVTVHIPRRPYVEHLPGIPTIRVFEALACGIPLISAPWADVEHLFTPGRDYLPVGNGEEMKKSLR AVLFDTDLAVSLAAAGLATIKARHTCRHRVDELLEILANCGTSKVTAKLQPWEAAE
Specific function: Unknown
COG id: COG4641
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42084; Mature: 42084
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFVFYTHSLISDWNHGNAHFLRGVMRDLQRRGHETLALEPEDAWSRTNLVSDQGPAAVE CEEEEEEHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCCCCHHHH RFHQVFPQHRSDFYGEAFDHEAALGDADVVIVHEWTAPRLVESLGRIRRKGAGFTLLFHD HHHHHHHHHHHCCCCCCCCCHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEC THHRAVSAEGDIASLMLDDYDGVLAFGQTLRERYLRAGWGKSVFTWHEAADDALFRPLPD CCCCEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHCCHHHCCCCC VEKSGDLIWIGNWGDDERSAEIAEFLIRPARDLALKTMVRGVRYPDHALDELRNAGIAYG CCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEC GWIANADVPAAFARHKVTVHIPRRPYVEHLPGIPTIRVFEALACGIPLISAPWADVEHLF CEECCCCCCHHHHHCEEEEEECCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHH TPGRDYLPVGNGEEMKKSLRAVLFDTDLAVSLAAAGLATIKARHTCRHRVDELLEILANC CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GTSKVTAKLQPWEAAE CCCCEEEEECCCCCCC >Mature Secondary Structure MKFVFYTHSLISDWNHGNAHFLRGVMRDLQRRGHETLALEPEDAWSRTNLVSDQGPAAVE CEEEEEEHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCCCCHHHH RFHQVFPQHRSDFYGEAFDHEAALGDADVVIVHEWTAPRLVESLGRIRRKGAGFTLLFHD HHHHHHHHHHHCCCCCCCCCHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEC THHRAVSAEGDIASLMLDDYDGVLAFGQTLRERYLRAGWGKSVFTWHEAADDALFRPLPD CCCCEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHCCHHHCCCCC VEKSGDLIWIGNWGDDERSAEIAEFLIRPARDLALKTMVRGVRYPDHALDELRNAGIAYG CCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEC GWIANADVPAAFARHKVTVHIPRRPYVEHLPGIPTIRVFEALACGIPLISAPWADVEHLF CEECCCCCCHHHHHCEEEEEECCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHH TPGRDYLPVGNGEEMKKSLRAVLFDTDLAVSLAAAGLATIKARHTCRHRVDELLEILANC CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GTSKVTAKLQPWEAAE CCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA