| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894610
Identifier: 190894610
GI number: 190894610
Start: 290880
End: 293003
Strand: Reverse
Name: 190894610
Synonym: RHECIAT_PC0000273
Alternate gene names: NA
Gene position: 293003-290880 (Counterclockwise)
Preceding gene: 190894611
Following gene: 190894609
Centisome position: 26.84
GC content: 58.29
Gene sequence:
>2124_bases ATGAGGCGGCGTCTTGGACTGATCCTGAGCATCTTGCCCGTCATGCTCTTTCCACAGTCCGGCAATTCGGCTCCAGCCGG GATAGAGGGGGATGCGCCCGAGCGCCTGCAGATACTCATCCGGGACGCGACCTGCGCGGAAGCTTCCGCGACTTCGGCAG CCAAATTGAATGGGACTTCTTTACGCGACGCATTGAGCAGCAGCACGGCGGCGCGGACGATATTCTACGTTTCTCCCGAT GGAAAAGACAGTTGGGGCGGCCTGCTTCCGACCGCCAATCAGCAGGGGAATGATGGACCTTTCGCCAGCATCGAACGAGC CCGTGATGCTGCCCGCGAGAAAGGCGGTCCCAATCTAATTGCACTCGGCAAAGGCGATTACTACCTTACCCAGCCGATCG TCTTTGACGCCCGCGATACCGGTTTGATCCTCACGGCAAGATGCAATGAAGTGCCGGTTCTGCATGGAGGGCCACGCGTG GGCAACTGGGCGCGGCAGTCCGACGGCAGTTGGACGGCGCCGCTGACATTGCCGCCGGAGCAAGGCGTCGGTGACCTTTT CGTCAATCGGATACGGCAAAATCGGGCTCGATTTCCCAATGCTCCGGCTGACGGCGACCTCCGCAAGGGGTGGTTATTCG CCGCAAAGTGCGAACCTGCAATCGATATGTGGGAAGGAAACACGCGCTTTTGTTTCCGTGCCGGCGATCTTCCGAATGTG GAGGATGCGAGCGGGCTGGTCGTCAATATCGTTGGAGGGTTTCAACCCGGAAGCCAGTGGGGCAATGACACGCTTCCAGT CGTATCCATCGATGGCGCCGGCCGGACCGTCCTTACCAAAGGCACAAGTTATTTCTTCACCGCAGAAGGCAGCCGCTACT TCCTTACCGGCGCCAAAAATTTGCTCGACGCGCCTGGAGAGTGGTGGCACGACCCTGCCGCGGGCCAGCTTCATTATATC CCGATCGATCAGTCGTTCCCCGATTCTGTCGTCGTTGCTGGTGTTTTGCCGACATTCTTGAAGCTGGATGGGGCCAATGG GATGGTTGTATCGGGGATCGAGATCAGAGACGGAGCGCCTGACGGCAGCGGCAAATTTTATACGGATACCAGAGGATTTG GCGCCATCCGGGTCGAACACGCCGATGGTGTCAAAATCCTCGGCAACAATATCGAGAATGTTGGCGTCGGGATCCATGTG ACGGAAAGCAAGCACGCGTTGATCGCCGGCAACGTGATTGCGGATGTGGCCGGCAACGGCATCTACGTCGGCACGAATTA CGGCACCTTCGGTAAGTCGGACGGGGCCAGAATCCTTTCGAACCATATCCATGACATTGGGCAGGTGTACATCGAGACTG GCGGAATATGGTTCCAGGCGGCCGACGACGTCAGGATCGCCGACAACCTGATCGAAAACACGGCGCAGTTCGGGATCGCC GGCGGTTCGCTGTGGGGTTCCAATGACGCGGTCTATAACGCCGTCATCGAGCACAATGTGGTCCGTAACGCCAACCAGCA GACTGCCGATGGCGGCGCCATCAAAATGATGGGCGAGCAGGCCGACTCCTTGAACAGCACCATCCGCTTCAACGTCGTGA CTGGGACCGGCCACCTCATGAACAGGCCCGACGGAACGTTCTGGCCTCCCGGATATGAAAACATTAGCGAATGGCCCACT CCCATCAGCTGGGCGATCTACACCGATGGAAAAGCGAGCGGTCTGCGCATCGAAGGAAATTCGCTCTCGGGCAACATATC GGCGATTGGCATCAACGGCGGTTGGAGCAATTTGGTGACGGGAAACGTCATCACAGGCGGATCGGGCACCGCTTTTCGCA TTGACGACGGTACCGGCAGGGGCTGGCACCCGCCATGGGCAGGCCCAAATCGCATCGAGAACAATGTCGTAACGATCAAC AATAGCAACGGGCTTGCTGCCTACGTCTATGCTCCCGACCACGGGCCTCAATATGTGCAATTCGCACGTAACCGCTACAT CGGCAATTTGAATAGCCAGAGCTTCCGAGTAGATCCTGGGATCATGCGGTCCGGAGAACTTGGCAGTCTACAGGATCTTC AGAAGGCCGGCGCGGACACGGGAAGCGTAATCGTACCCGAGTAA
Upstream 100 bases:
>100_bases GCCATCATCATGTTTTCGTTGTACGCGCCCGTCGTTTCGGTCAGTCATTCGCCGTCGTGGCAGGCGTCTCGCGTGGCCTT ATGAGCGGGTTGCAGACATC
Downstream 100 bases:
>100_bases CAAGAACGTCACCACCGGCAGTGTTTTCAGGCGATTAAATCGGGCGCCGCGGCAACTTGTACTGCCGAACAAGTATAGTT TCGCCATGCCGGCAACTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 707; Mature: 707
Protein sequence:
>707_residues MRRRLGLILSILPVMLFPQSGNSAPAGIEGDAPERLQILIRDATCAEASATSAAKLNGTSLRDALSSSTAARTIFYVSPD GKDSWGGLLPTANQQGNDGPFASIERARDAAREKGGPNLIALGKGDYYLTQPIVFDARDTGLILTARCNEVPVLHGGPRV GNWARQSDGSWTAPLTLPPEQGVGDLFVNRIRQNRARFPNAPADGDLRKGWLFAAKCEPAIDMWEGNTRFCFRAGDLPNV EDASGLVVNIVGGFQPGSQWGNDTLPVVSIDGAGRTVLTKGTSYFFTAEGSRYFLTGAKNLLDAPGEWWHDPAAGQLHYI PIDQSFPDSVVVAGVLPTFLKLDGANGMVVSGIEIRDGAPDGSGKFYTDTRGFGAIRVEHADGVKILGNNIENVGVGIHV TESKHALIAGNVIADVAGNGIYVGTNYGTFGKSDGARILSNHIHDIGQVYIETGGIWFQAADDVRIADNLIENTAQFGIA GGSLWGSNDAVYNAVIEHNVVRNANQQTADGGAIKMMGEQADSLNSTIRFNVVTGTGHLMNRPDGTFWPPGYENISEWPT PISWAIYTDGKASGLRIEGNSLSGNISAIGINGGWSNLVTGNVITGGSGTAFRIDDGTGRGWHPPWAGPNRIENNVVTIN NSNGLAAYVYAPDHGPQYVQFARNRYIGNLNSQSFRVDPGIMRSGELGSLQDLQKAGADTGSVIVPE
Sequences:
>Translated_707_residues MRRRLGLILSILPVMLFPQSGNSAPAGIEGDAPERLQILIRDATCAEASATSAAKLNGTSLRDALSSSTAARTIFYVSPD GKDSWGGLLPTANQQGNDGPFASIERARDAAREKGGPNLIALGKGDYYLTQPIVFDARDTGLILTARCNEVPVLHGGPRV GNWARQSDGSWTAPLTLPPEQGVGDLFVNRIRQNRARFPNAPADGDLRKGWLFAAKCEPAIDMWEGNTRFCFRAGDLPNV EDASGLVVNIVGGFQPGSQWGNDTLPVVSIDGAGRTVLTKGTSYFFTAEGSRYFLTGAKNLLDAPGEWWHDPAAGQLHYI PIDQSFPDSVVVAGVLPTFLKLDGANGMVVSGIEIRDGAPDGSGKFYTDTRGFGAIRVEHADGVKILGNNIENVGVGIHV TESKHALIAGNVIADVAGNGIYVGTNYGTFGKSDGARILSNHIHDIGQVYIETGGIWFQAADDVRIADNLIENTAQFGIA GGSLWGSNDAVYNAVIEHNVVRNANQQTADGGAIKMMGEQADSLNSTIRFNVVTGTGHLMNRPDGTFWPPGYENISEWPT PISWAIYTDGKASGLRIEGNSLSGNISAIGINGGWSNLVTGNVITGGSGTAFRIDDGTGRGWHPPWAGPNRIENNVVTIN NSNGLAAYVYAPDHGPQYVQFARNRYIGNLNSQSFRVDPGIMRSGELGSLQDLQKAGADTGSVIVPE >Mature_707_residues MRRRLGLILSILPVMLFPQSGNSAPAGIEGDAPERLQILIRDATCAEASATSAAKLNGTSLRDALSSSTAARTIFYVSPD GKDSWGGLLPTANQQGNDGPFASIERARDAAREKGGPNLIALGKGDYYLTQPIVFDARDTGLILTARCNEVPVLHGGPRV GNWARQSDGSWTAPLTLPPEQGVGDLFVNRIRQNRARFPNAPADGDLRKGWLFAAKCEPAIDMWEGNTRFCFRAGDLPNV EDASGLVVNIVGGFQPGSQWGNDTLPVVSIDGAGRTVLTKGTSYFFTAEGSRYFLTGAKNLLDAPGEWWHDPAAGQLHYI PIDQSFPDSVVVAGVLPTFLKLDGANGMVVSGIEIRDGAPDGSGKFYTDTRGFGAIRVEHADGVKILGNNIENVGVGIHV TESKHALIAGNVIADVAGNGIYVGTNYGTFGKSDGARILSNHIHDIGQVYIETGGIWFQAADDVRIADNLIENTAQFGIA GGSLWGSNDAVYNAVIEHNVVRNANQQTADGGAIKMMGEQADSLNSTIRFNVVTGTGHLMNRPDGTFWPPGYENISEWPT PISWAIYTDGKASGLRIEGNSLSGNISAIGINGGWSNLVTGNVITGGSGTAFRIDDGTGRGWHPPWAGPNRIENNVVTIN NSNGLAAYVYAPDHGPQYVQFARNRYIGNLNSQSFRVDPGIMRSGELGSLQDLQKAGADTGSVIVPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75086; Mature: 75086
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRLGLILSILPVMLFPQSGNSAPAGIEGDAPERLQILIRDATCAEASATSAAKLNGTS CCHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEECCCCH LRDALSSSTAARTIFYVSPDGKDSWGGLLPTANQQGNDGPFASIERARDAAREKGGPNLI HHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEE ALGKGDYYLTQPIVFDARDTGLILTARCNEVPVLHGGPRVGNWARQSDGSWTAPLTLPPE EECCCCEEEECCEEEECCCCCEEEEEECCCCCEEECCCCCCCCHHCCCCCEECEEECCCC QGVGDLFVNRIRQNRARFPNAPADGDLRKGWLFAAKCEPAIDMWEGNTRFCFRAGDLPNV CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCEEEEECCCCCCC EDASGLVVNIVGGFQPGSQWGNDTLPVVSIDGAGRTVLTKGTSYFFTAEGSRYFLTGAKN CCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCEEEECCCEEEEEECCCEEEEECCHH LLDAPGEWWHDPAAGQLHYIPIDQSFPDSVVVAGVLPTFLKLDGANGMVVSGIEIRDGAP HHCCCCCCCCCCCCCEEEEEECCCCCCCCEEHHHHHCHHEEECCCCCEEEEEEEEECCCC DGSGKFYTDTRGFGAIRVEHADGVKILGNNIENVGVGIHVTESKHALIAGNVIADVAGNG CCCCEEEEECCCCEEEEEECCCCEEEECCCCCEEEEEEEEECCCCEEEECCEEEECCCCC IYVGTNYGTFGKSDGARILSNHIHDIGQVYIETGGIWFQAADDVRIADNLIENTAQFGIA EEEECCCCCCCCCCCHHHHHHHHHHCEEEEEEECCEEEEECCCCHHHHHHHHHHHHHCCC GGSLWGSNDAVYNAVIEHNVVRNANQQTADGGAIKMMGEQADSLNSTIRFNVVTGTGHLM CCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCC NRPDGTFWPPGYENISEWPTPISWAIYTDGKASGLRIEGNSLSGNISAIGINGGWSNLVT CCCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCEEEECCCCCCCEEEEEECCCCCCCEE GNVITGGSGTAFRIDDGTGRGWHPPWAGPNRIENNVVTINNSNGLAAYVYAPDHGPQYVQ CCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCHHHH FARNRYIGNLNSQSFRVDPGIMRSGELGSLQDLQKAGADTGSVIVPE HHHHHCCCCCCCCCEEECCCCCCCCCCCCHHHHHHCCCCCCCEEECC >Mature Secondary Structure MRRRLGLILSILPVMLFPQSGNSAPAGIEGDAPERLQILIRDATCAEASATSAAKLNGTS CCHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEECCCCH LRDALSSSTAARTIFYVSPDGKDSWGGLLPTANQQGNDGPFASIERARDAAREKGGPNLI HHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEE ALGKGDYYLTQPIVFDARDTGLILTARCNEVPVLHGGPRVGNWARQSDGSWTAPLTLPPE EECCCCEEEECCEEEECCCCCEEEEEECCCCCEEECCCCCCCCHHCCCCCEECEEECCCC QGVGDLFVNRIRQNRARFPNAPADGDLRKGWLFAAKCEPAIDMWEGNTRFCFRAGDLPNV CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCEEEEECCCCCCC EDASGLVVNIVGGFQPGSQWGNDTLPVVSIDGAGRTVLTKGTSYFFTAEGSRYFLTGAKN CCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCEEEECCCEEEEEECCCEEEEECCHH LLDAPGEWWHDPAAGQLHYIPIDQSFPDSVVVAGVLPTFLKLDGANGMVVSGIEIRDGAP HHCCCCCCCCCCCCCEEEEEECCCCCCCCEEHHHHHCHHEEECCCCCEEEEEEEEECCCC DGSGKFYTDTRGFGAIRVEHADGVKILGNNIENVGVGIHVTESKHALIAGNVIADVAGNG CCCCEEEEECCCCEEEEEECCCCEEEECCCCCEEEEEEEEECCCCEEEECCEEEECCCCC IYVGTNYGTFGKSDGARILSNHIHDIGQVYIETGGIWFQAADDVRIADNLIENTAQFGIA EEEECCCCCCCCCCCHHHHHHHHHHCEEEEEEECCEEEEECCCCHHHHHHHHHHHHHCCC GGSLWGSNDAVYNAVIEHNVVRNANQQTADGGAIKMMGEQADSLNSTIRFNVVTGTGHLM CCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCC NRPDGTFWPPGYENISEWPTPISWAIYTDGKASGLRIEGNSLSGNISAIGINGGWSNLVT CCCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCEEEECCCCCCCEEEEEECCCCCCCEE GNVITGGSGTAFRIDDGTGRGWHPPWAGPNRIENNVVTINNSNGLAAYVYAPDHGPQYVQ CCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCHHHH FARNRYIGNLNSQSFRVDPGIMRSGELGSLQDLQKAGADTGSVIVPE HHHHHCCCCCCCCCEEECCCCCCCCCCCCHHHHHHCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA