| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894588
Identifier: 190894588
GI number: 190894588
Start: 254546
End: 255352
Strand: Reverse
Name: 190894588
Synonym: RHECIAT_PC0000251
Alternate gene names: NA
Gene position: 255352-254546 (Counterclockwise)
Preceding gene: 190894589
Following gene: 190894587
Centisome position: 23.39
GC content: 56.75
Gene sequence:
>807_bases GTGCTTTTGATAGGCATGTTGCTGGTAGCGGGCATCGTCGTGTTTTTCGGCGGAAGCGACCGCCTCGAAAGTCCGGCGGG ACGCGTTGAAGATCGAGCTCTCGATAAGGCTGCAGCGTCATCGGAAACCGCCGACCGCCGTGATGATGAGGCTGCTTCTC CTCTCCTGCTGATGTCGATATCGCCACAGCTGATCGAGGTCCCGAAGCCGGAGCTGGCAGGTGAGTTTCTGCGGATGTGG CGCGTCTCGGGGTCGAATATTTGCTCTGCTCTTCGAGAGGCCGGTATCGCGGTGAGCGAGTGGAAAGCCGCGTCGATGCG CAATCGCAATTATGAATGTTATTTTCAGCGCGTTTACGAACGGGACGAGACGCGTCCCCTGAGTTCCACCTTCCTCAAGG TTCGTGGAAATGAAATGGGCGAGATTGTTGAGGTCCGCGCCAGGATCATCGGGCCGACGACCGACGATGAGGGGCGTCTC GCCCCGGCCATCCTGCGCATGTTCGAGATCATTGTGAAGCAGGCGTGCTGGCGTGATTTCGAGGATAGTCTTACGTCGAT CCAAAAGCTTCGAAATGTCGAATTCGAACGGTTCGGCGCCTATCTCAGTTTCAAGAGCGAAGCCGACGGCGGAAGCAATT TTGATTTTGTTCTCGGCCTCAAGGCAACCTCAGCTTCGCAGGTAAGGACCAAGACCTATTTTTCGCCGGAGCGCTGGCTA ACCGGAACCGATCGCCGCAATGTTTCCGGGAACGTGATCCTCACGGACCGCTCGGGCACGTCCATGTTAGCCAATTGTGC AAATTGA
Upstream 100 bases:
>100_bases CGTGGATAAGGTGTTATCAGCCGTACAGCCTCCGGGCGGCGGTCCACGTCCCCACCGAAATTTCCCATGGCGGAACGTCC CCCGCTGGCTGCTTTGGCCA
Downstream 100 bases:
>100_bases CGGCATAGCCGGAGGGTGATCTGCAAGAGTTGCTACGACCATGCAGAGGAGGGCGCCACCAACAACGCTTTACAAGTCCT CGCGGATAAAAAAACGTAAT
Product: putative exopolysaccharide synthesis protein
Products: NA
Alternate protein names: Exopolysaccharide Synthesis Protein; Exopolysaccharide Synthesis Related Protein
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MLLIGMLLVAGIVVFFGGSDRLESPAGRVEDRALDKAAASSETADRRDDEAASPLLLMSISPQLIEVPKPELAGEFLRMW RVSGSNICSALREAGIAVSEWKAASMRNRNYECYFQRVYERDETRPLSSTFLKVRGNEMGEIVEVRARIIGPTTDDEGRL APAILRMFEIIVKQACWRDFEDSLTSIQKLRNVEFERFGAYLSFKSEADGGSNFDFVLGLKATSASQVRTKTYFSPERWL TGTDRRNVSGNVILTDRSGTSMLANCAN
Sequences:
>Translated_268_residues MLLIGMLLVAGIVVFFGGSDRLESPAGRVEDRALDKAAASSETADRRDDEAASPLLLMSISPQLIEVPKPELAGEFLRMW RVSGSNICSALREAGIAVSEWKAASMRNRNYECYFQRVYERDETRPLSSTFLKVRGNEMGEIVEVRARIIGPTTDDEGRL APAILRMFEIIVKQACWRDFEDSLTSIQKLRNVEFERFGAYLSFKSEADGGSNFDFVLGLKATSASQVRTKTYFSPERWL TGTDRRNVSGNVILTDRSGTSMLANCAN >Mature_268_residues MLLIGMLLVAGIVVFFGGSDRLESPAGRVEDRALDKAAASSETADRRDDEAASPLLLMSISPQLIEVPKPELAGEFLRMW RVSGSNICSALREAGIAVSEWKAASMRNRNYECYFQRVYERDETRPLSSTFLKVRGNEMGEIVEVRARIIGPTTDDEGRL APAILRMFEIIVKQACWRDFEDSLTSIQKLRNVEFERFGAYLSFKSEADGGSNFDFVLGLKATSASQVRTKTYFSPERWL TGTDRRNVSGNVILTDRSGTSMLANCAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29842; Mature: 29842
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLIGMLLVAGIVVFFGGSDRLESPAGRVEDRALDKAAASSETADRRDDEAASPLLLMSI CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCEEEEEC SPQLIEVPKPELAGEFLRMWRVSGSNICSALREAGIAVSEWKAASMRNRNYECYFQRVYE CCHHEECCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHH RDETRPLSSTFLKVRGNEMGEIVEVRARIIGPTTDDEGRLAPAILRMFEIIVKQACWRDF HCCCCCHHHHHEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCH EDSLTSIQKLRNVEFERFGAYLSFKSEADGGSNFDFVLGLKATSASQVRTKTYFSPERWL HHHHHHHHHHHCCCHHHHHHEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCHHCC TGTDRRNVSGNVILTDRSGTSMLANCAN CCCCCCCCCCCEEEECCCCCHHHHHCCC >Mature Secondary Structure MLLIGMLLVAGIVVFFGGSDRLESPAGRVEDRALDKAAASSETADRRDDEAASPLLLMSI CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCEEEEEC SPQLIEVPKPELAGEFLRMWRVSGSNICSALREAGIAVSEWKAASMRNRNYECYFQRVYE CCHHEECCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHH RDETRPLSSTFLKVRGNEMGEIVEVRARIIGPTTDDEGRLAPAILRMFEIIVKQACWRDF HCCCCCHHHHHEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCH EDSLTSIQKLRNVEFERFGAYLSFKSEADGGSNFDFVLGLKATSASQVRTKTYFSPERWL HHHHHHHHHHHCCCHHHHHHEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCHHCC TGTDRRNVSGNVILTDRSGTSMLANCAN CCCCCCCCCCCEEEECCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA