| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894557
Identifier: 190894557
GI number: 190894557
Start: 219581
End: 219904
Strand: Reverse
Name: 190894557
Synonym: RHECIAT_PC0000219
Alternate gene names: NA
Gene position: 219904-219581 (Counterclockwise)
Preceding gene: 190894558
Following gene: 190894552
Centisome position: 20.15
GC content: 59.57
Gene sequence:
>324_bases ATGGATGATCATGAGTTCCGTCTTTGCTTGAAAATCGATGTCGTCCAGCTCGACTTCTGGGTCGAACGGGGCTGGCTTGT CCCGGCGATGTCAGGCGAAGGGCGGCAGTTTCGCGAGGCCGACGTCGCCCGCGGCCGGCTCATCCTCGATCTCATGGGCA ATATGGGCGTCAACGAAGCCGGGGTCGATGTCGTCATGGATCTGCTCGACCAACTGCACACTCTGCGGGGAACGATGAGC AAGCTGGTGACGGCAATCGAGCGGCAAGAGCGGGAGGTTCAGCAGCGGCTCATCGAAAGTCTTGAGGACATAGACCGGTT CTGA
Upstream 100 bases:
>100_bases TCGTGCTGCCCGATAATCCGGACGAACGGCTGACCTCCCTGGTGAAGGAATGGGCGGCGGCAAATCCATACGATCCGAGG AAGAACATGGAGGCCTGATC
Downstream 100 bases:
>100_bases GGAGACGGGCGCACGGATATCCTCATGCTGTGAACCAGTAGCGGACGATGTGGAAGAACAGCGGCGCGGCGAAGGTAATG GAGTCGAGACGATCGAGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MDDHEFRLCLKIDVVQLDFWVERGWLVPAMSGEGRQFREADVARGRLILDLMGNMGVNEAGVDVVMDLLDQLHTLRGTMS KLVTAIERQEREVQQRLIESLEDIDRF
Sequences:
>Translated_107_residues MDDHEFRLCLKIDVVQLDFWVERGWLVPAMSGEGRQFREADVARGRLILDLMGNMGVNEAGVDVVMDLLDQLHTLRGTMS KLVTAIERQEREVQQRLIESLEDIDRF >Mature_107_residues MDDHEFRLCLKIDVVQLDFWVERGWLVPAMSGEGRQFREADVARGRLILDLMGNMGVNEAGVDVVMDLLDQLHTLRGTMS KLVTAIERQEREVQQRLIESLEDIDRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12386; Mature: 12386
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDHEFRLCLKIDVVQLDFWVERGWLVPAMSGEGRQFREADVARGRLILDLMGNMGVNEA CCCCCEEEEEEEEHHHHHHHHHCCEEEECCCCCCCHHHHHHHHCCHHHHHHHCCCCCCHH GVDVVMDLLDQLHTLRGTMSKLVTAIERQEREVQQRLIESLEDIDRF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDDHEFRLCLKIDVVQLDFWVERGWLVPAMSGEGRQFREADVARGRLILDLMGNMGVNEA CCCCCEEEEEEEEHHHHHHHHHCCEEEECCCCCCCHHHHHHHHCCHHHHHHHCCCCCCHH GVDVVMDLLDQLHTLRGTMSKLVTAIERQEREVQQRLIESLEDIDRF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA