Click here to switch to the map view.

The map label for this gene is yufP [H]

Identifier: 190894549

GI number: 190894549

Start: 212074

End: 213123

Strand: Reverse

Name: yufP [H]

Synonym: RHECIAT_PC0000211

Alternate gene names: 190894549

Gene position: 213123-212074 (Counterclockwise)

Preceding gene: 190894550

Following gene: 190894548

Centisome position: 19.53

GC content: 63.24

Gene sequence:

>1050_bases
ATGCGATTTGAGCGCCGCGAGCACCGCCCGTTTTACCTGCTGATCGCCACACCCGTCATCGCCATCATCGCGGCACTGGC
GCTGGCCGGCATCCTGATCTCGATCGCCGGCGCGCCTGTTCTCGACGCCTATTGGCGCATCCTGACCGGCGCCTTCGGCT
CGCGGCTTTCGGCGACCGAGACACTGACGCGGGCAACGCCGCTGATGCTGACCGGACTTGCCGCCGCCGTCGCCTTTCGC
GCGCGGCTCTGGAATATCGGCGCCGAGGGCCAGTTCTATCTCGGCGCCATCGCCGTTGCGGCGGCAAGCTCGAAACTGCT
CGGCACTCTTCCGGCACCCATTCTCATTCCGCTGCTGCTGCTGATCGGTGCGATCGCCGGCATGGTGCTGATCTTGCTCC
CGCTGTGGCTGAGACTGCGCTTTTCCGTCGATGAGGTCGTCACCAGCCTGCTGATGAATTTCATCGCCGTGCTTTTCGTC
TCGATGCTGATCGACGGGGTTCTCAAGGATCCGCTCGCCTTCGGCTGGCCGCAGTCGCAATCCGTCAGCGATCATGCCAT
GCTGCCGAAGCTGATCGCCCGTTCGCGCCTGCATATCGGTTTTGCGATCGCGATCGTGCTGGCGATCGTCGTTCACTTCG
TCCAGTCCCGCACCGTGTTTGGCATGCAGTCGCGCGCCGCCGGCCTCAATCCTGCCGGTGCGGTTTTTGCTGGTGTGCCG
CTCGGAAGAACACTGGTGAAGATTGCCTGTCTCTCCGGTGGGCTTGCAGGGCTTGCGGGAGCGATCGAGGTGATGGGCGT
CAAGGGTTACGTCACGACCGACCTGTCGCCCGGTTTCGGCTACGCCGGCATCGTGGTGGCGATGCTTGCCAATCTCAATC
CGCTCGGCGTCGTCTTCGCCGCCATTTTCACGGCCACGATGTTCGTCGGCGCCGACGGCATGAGCCGGGGCCTCGGCATC
CCGACCTATATTGCCGACGTCACGGTGGCGCTATCGCTACTGACGATGCTGATCGCATTGTTCTTCACCCAATACAGGAT
AAGGCGATGA

Upstream 100 bases:

>100_bases
GGCGGCCGCCTGTCGCCGCCCGTCAACGCCGACGGCGCCGACGCCCGCAGGCTGGGGCTGATGATGGCCGGCGAATGGCA
AGAAACCCGCGAGGCCGATC

Downstream 100 bases:

>100_bases
CGCAGCTGTTCGATATCATCGCCTCCGCCGGGCTCTGGGCGGCAGTCCTGCGGATCGCCACGCCGCTGATTTTCGGCACG
CTCGGCGCTTTGCTCTGCGA

Product: putative sugar ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MRFERREHRPFYLLIATPVIAIIAALALAGILISIAGAPVLDAYWRILTGAFGSRLSATETLTRATPLMLTGLAAAVAFR
ARLWNIGAEGQFYLGAIAVAAASSKLLGTLPAPILIPLLLLIGAIAGMVLILLPLWLRLRFSVDEVVTSLLMNFIAVLFV
SMLIDGVLKDPLAFGWPQSQSVSDHAMLPKLIARSRLHIGFAIAIVLAIVVHFVQSRTVFGMQSRAAGLNPAGAVFAGVP
LGRTLVKIACLSGGLAGLAGAIEVMGVKGYVTTDLSPGFGYAGIVVAMLANLNPLGVVFAAIFTATMFVGADGMSRGLGI
PTYIADVTVALSLLTMLIALFFTQYRIRR

Sequences:

>Translated_349_residues
MRFERREHRPFYLLIATPVIAIIAALALAGILISIAGAPVLDAYWRILTGAFGSRLSATETLTRATPLMLTGLAAAVAFR
ARLWNIGAEGQFYLGAIAVAAASSKLLGTLPAPILIPLLLLIGAIAGMVLILLPLWLRLRFSVDEVVTSLLMNFIAVLFV
SMLIDGVLKDPLAFGWPQSQSVSDHAMLPKLIARSRLHIGFAIAIVLAIVVHFVQSRTVFGMQSRAAGLNPAGAVFAGVP
LGRTLVKIACLSGGLAGLAGAIEVMGVKGYVTTDLSPGFGYAGIVVAMLANLNPLGVVFAAIFTATMFVGADGMSRGLGI
PTYIADVTVALSLLTMLIALFFTQYRIRR
>Mature_349_residues
MRFERREHRPFYLLIATPVIAIIAALALAGILISIAGAPVLDAYWRILTGAFGSRLSATETLTRATPLMLTGLAAAVAFR
ARLWNIGAEGQFYLGAIAVAAASSKLLGTLPAPILIPLLLLIGAIAGMVLILLPLWLRLRFSVDEVVTSLLMNFIAVLFV
SMLIDGVLKDPLAFGWPQSQSVSDHAMLPKLIARSRLHIGFAIAIVLAIVVHFVQSRTVFGMQSRAAGLNPAGAVFAGVP
LGRTLVKIACLSGGLAGLAGAIEVMGVKGYVTTDLSPGFGYAGIVVAMLANLNPLGVVFAAIFTATMFVGADGMSRGLGI
PTYIADVTVALSLLTMLIALFFTQYRIRR

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 36828; Mature: 36828

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFERREHRPFYLLIATPVIAIIAALALAGILISIAGAPVLDAYWRILTGAFGSRLSATE
CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHH
TLTRATPLMLTGLAAAVAFRARLWNIGAEGQFYLGAIAVAAASSKLLGTLPAPILIPLLL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LIGAIAGMVLILLPLWLRLRFSVDEVVTSLLMNFIAVLFVSMLIDGVLKDPLAFGWPQSQ
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCC
SVSDHAMLPKLIARSRLHIGFAIAIVLAIVVHFVQSRTVFGMQSRAAGLNPAGAVFAGVP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCHHHHCCCCCCHHHHHCCCC
LGRTLVKIACLSGGLAGLAGAIEVMGVKGYVTTDLSPGFGYAGIVVAMLANLNPLGVVFA
HHHHHHHHHHHHCCHHHHHHHHHHEECCCEEEECCCCCCCHHHHHHHHHHCCCHHHHHHH
AIFTATMFVGADGMSRGLGIPTYIADVTVALSLLTMLIALFFTQYRIRR
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRFERREHRPFYLLIATPVIAIIAALALAGILISIAGAPVLDAYWRILTGAFGSRLSATE
CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHH
TLTRATPLMLTGLAAAVAFRARLWNIGAEGQFYLGAIAVAAASSKLLGTLPAPILIPLLL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LIGAIAGMVLILLPLWLRLRFSVDEVVTSLLMNFIAVLFVSMLIDGVLKDPLAFGWPQSQ
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCC
SVSDHAMLPKLIARSRLHIGFAIAIVLAIVVHFVQSRTVFGMQSRAAGLNPAGAVFAGVP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCHHHHCCCCCCHHHHHCCCC
LGRTLVKIACLSGGLAGLAGAIEVMGVKGYVTTDLSPGFGYAGIVVAMLANLNPLGVVFA
HHHHHHHHHHHHCCHHHHHHHHHHEECCCEEEECCCCCCCHHHHHHHHHHCCCHHHHHHH
AIFTATMFVGADGMSRGLGIPTYIADVTVALSLLTMLIALFFTQYRIRR
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]