Click here to switch to the map view.

The map label for this gene is ycgI [H]

Identifier: 190894442

GI number: 190894442

Start: 102983

End: 103633

Strand: Reverse

Name: ycgI [H]

Synonym: RHECIAT_PC0000104

Alternate gene names: 190894442

Gene position: 103633-102983 (Counterclockwise)

Preceding gene: 190894443

Following gene: 190894441

Centisome position: 9.49

GC content: 59.29

Gene sequence:

>651_bases
ATGTCCGATTTCATCCAGACCTCCCCTGCCCGCGCCGTGGAAAATGCCGCGCAGCATCACTTCATCGCAGCCGAAGCGCC
CTGGTCCGGCATCGTGCGCAAGGGCCAGATCATCCGTATCGAGGATAGCTACGGCCAACAGGCGATCGACACGCTCTTCT
ATCGCGCCGATGATTTCTCCGAGCGCTATTCCAACCAGGACACGATGCGCATCCAAGGCGCCGCCTATGTCGGCATCGGC
ACGAAGATCATGTCGAGCGAAGGCAATGTCATGCTGACCATGACGGCCGACAGCTGCGGCCGTCACGATACCTCGGCCGG
CGCCTGCTCTTGCGAGAGCAATACGGTGCGCTTCGGCCACGGCACGAAATACCTGCATGCCTGCCGCGACAACTTCCTGC
TCGAAGTTTCGAAACACGGCATGGATAAGCGCGATATCGTGCCGAATATCAACTTTTTCATGAACGTGCCGATCCAGCCG
ACCGGTGAGATGACGATCGTCGACGGTATTTCCACAGCCGGGGACTATATCGAACTCGTCGCCGAGATGGATGTGCTCTG
CGTCATCTCCAATTGCCCGCAGGTCAACAATCCGTGCAACGGCTTCGATCCGACGCCGATCCGGGTGCTGATCTGGGATG
GCGAGGCCTGA

Upstream 100 bases:

>100_bases
GCTGCAGTCCCGGCTGCGGACGATCTTTGCCGCACGGCAACCGCCGAAGCGGTGCGCGGTTTCGAAAACAACGCCTTGAT
GCGGGCCTGAGGAGAAGACG

Downstream 100 bases:

>100_bases
TCATGTTCAAGAAAATCCTGATCGCGAACCGCGGCGAAATCGCCGTGCGGGTCATCAAGACGCTGCAGCGCATGGGCATT
GCCTCGGTCGCCGTCTATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MSDFIQTSPARAVENAAQHHFIAAEAPWSGIVRKGQIIRIEDSYGQQAIDTLFYRADDFSERYSNQDTMRIQGAAYVGIG
TKIMSSEGNVMLTMTADSCGRHDTSAGACSCESNTVRFGHGTKYLHACRDNFLLEVSKHGMDKRDIVPNINFFMNVPIQP
TGEMTIVDGISTAGDYIELVAEMDVLCVISNCPQVNNPCNGFDPTPIRVLIWDGEA

Sequences:

>Translated_216_residues
MSDFIQTSPARAVENAAQHHFIAAEAPWSGIVRKGQIIRIEDSYGQQAIDTLFYRADDFSERYSNQDTMRIQGAAYVGIG
TKIMSSEGNVMLTMTADSCGRHDTSAGACSCESNTVRFGHGTKYLHACRDNFLLEVSKHGMDKRDIVPNINFFMNVPIQP
TGEMTIVDGISTAGDYIELVAEMDVLCVISNCPQVNNPCNGFDPTPIRVLIWDGEA
>Mature_215_residues
SDFIQTSPARAVENAAQHHFIAAEAPWSGIVRKGQIIRIEDSYGQQAIDTLFYRADDFSERYSNQDTMRIQGAAYVGIGT
KIMSSEGNVMLTMTADSCGRHDTSAGACSCESNTVRFGHGTKYLHACRDNFLLEVSKHGMDKRDIVPNINFFMNVPIQPT
GEMTIVDGISTAGDYIELVAEMDVLCVISNCPQVNNPCNGFDPTPIRVLIWDGEA

Specific function: Unknown

COG id: COG3665

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018959 [H]

Pfam domain/function: PF09347 DUF1989 [H]

EC number: NA

Molecular weight: Translated: 23750; Mature: 23619

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFIQTSPARAVENAAQHHFIAAEAPWSGIVRKGQIIRIEDSYGQQAIDTLFYRADDFS
CCCCCCCCCHHHHHHHHHHEEEEECCCHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCHH
ERYSNQDTMRIQGAAYVGIGTKIMSSEGNVMLTMTADSCGRHDTSAGACSCESNTVRFGH
HHHCCCCEEEEECEEEEEECEEEECCCCCEEEEEECCCCCCCCCCCCCEECCCCEEEECC
GTKYLHACRDNFLLEVSKHGMDKRDIVPNINFFMNVPIQPTGEMTIVDGISTAGDYIELV
CCHHHHHHCCCEEEEEHHCCCCCHHCCCCCCEEEECCCCCCCCEEEEECCCCHHHHHHHH
AEMDVLCVISNCPQVNNPCNGFDPTPIRVLIWDGEA
HHCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCC
>Mature Secondary Structure 
SDFIQTSPARAVENAAQHHFIAAEAPWSGIVRKGQIIRIEDSYGQQAIDTLFYRADDFS
CCCCCCCCHHHHHHHHHHEEEEECCCHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCHH
ERYSNQDTMRIQGAAYVGIGTKIMSSEGNVMLTMTADSCGRHDTSAGACSCESNTVRFGH
HHHCCCCEEEEECEEEEEECEEEECCCCCEEEEEECCCCCCCCCCCCCEECCCCEEEECC
GTKYLHACRDNFLLEVSKHGMDKRDIVPNINFFMNVPIQPTGEMTIVDGISTAGDYIELV
CCHHHHHHCCCEEEEEHHCCCCCHHCCCCCCEEEECCCCCCCCEEEEECCCCHHHHHHHH
AEMDVLCVISNCPQVNNPCNGFDPTPIRVLIWDGEA
HHCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 10568751 [H]