| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is ordL [C]
Identifier: 190894400
GI number: 190894400
Start: 59980
End: 61236
Strand: Reverse
Name: ordL [C]
Synonym: RHECIAT_PC0000062
Alternate gene names: 190894400
Gene position: 61236-59980 (Counterclockwise)
Preceding gene: 190894401
Following gene: 190894393
Centisome position: 5.61
GC content: 65.87
Gene sequence:
>1257_bases ATGCCGCGGCCGGCGCTGAGCGAAGCGATCTTGGCCGATGTCGCGATCATCGGCGGGGGCTTTGCCGGCCTGTCAGCGGC CCACCGGCTCTCGCGGCTCGACCCGACGCTGCGCATCGTCGTTCTCGAAGCGGGCATCGTCGGCGAGGGGCCGGCCGGCG CCAATTCCGGCTTCATCATCGACCTGCCCCACGAAGTTTCCTCGGACGATTTCAGCGGCGAGTCGGAGGGCAAGTTCTGC GACTCCGTGCTGCTGCAGCGTTCGGCAATCGTGCTCGCCAGCGAACTGGCTGCCGAGAACGGCTGGGGCAAGGAGCTGTT CGATCCGTGTGGCCGCTACAGCGTCGCGATGAGCACGGAAGGCGACAAGCATCTCGAAGCCTATTCGCTGCTGCTTGGGA AAATGGGGGAAGCGCATCGCCTGCTCAAGCGGCAAGAGATCGAGGCCGTGACCGGATCGAAGGCGTTCACCTCCGGCCTG TTCTCGCCCGGCACGGTCATCATCCAGCCGGCCGCCTATATCAGCGGCGTCGCCGACTGCCTGAAGGCGCCGGTGCGGCT TTGCGAGCAGACGCCGGTTCTCTCCTTCGAGCGCTCCGGCGACGCTTGGCTGCTGAAGACACCGCACGGATCGGTGCTGG CGGCAAAGATCATCCTCGCCAATAACGGCCATGCGGAAAGCTTCGGTTTCTTCCGCAGGCGCCTCCTGCATGTCTTCACC TATGCATCTCTGACCCAGGAGTTTGATCCGGCAAGGCTCGGCGGTGACAGGAAATGGGCAGCGACCCCGGCCTTGCCGAT GGGAACGACGGTGCGGCGCATCAACACCGGCGGCGGCGACCGCGTCCTCATACGTTCGCGCTACAGCTACAATCCCGGTA TCGAAATCGGCGATGCCGCCATCCGCAGCGCCGGCCGCCTGCATGACGGCAAATTCGCGCATCGTTTCCCCACGCTTGCC GGTGTCGGCATGCAGTATCGCTGGGGCGGCGCGATGGCGCTGACGCATAACCATGTGCCGGCCTTCGGAGAGATCGAACG CGGCGTCTTTGCTGCTTGCGGCTGCAACGGACTGGGCGCATCGAATTCCACCGCCGCCGGCATTGCCGCGGCCGAACGGG TGCTGGGGCACGATTCCGAACTCGGCCGCGTTTACAGCCGCCTGGCGGCGCCGGTTTTGCTGCCGCCGCAGCCGCTAACG ACGATCGGCGCGAAGATCCATCTCGCTTGGCGCGAATGGCGTGCCGGAGCGGAGTGA
Upstream 100 bases:
>100_bases CGATTTAACCGTGAGCCGGGCCGCAAAGAACGTCTTCGTCGCATCGAAGCTACCCAAACGCGCCGGCATTTCGGGCTGGG TGGCGACACTCCCGCCGCGC
Downstream 100 bases:
>100_bases GGCTGCGTCAGGCACGCGCTCTAAAACGTAAGCTGCACCTTACAGGCAGCAGTCCGGTCGCCGGCCAGTATGAAGGCTGC GGTGGCGTCTTCCAGCGGCA
Product: putative oxidoreductase
Products: NA
Alternate protein names: Oxidoreductase; Oxidoreductase Protein; Glycine/D-Amino Acid Oxidase; Glycine/D-Amino Acid Oxidase Deaminating; Oxidoreductase-Related Protein; Dehydrogenase/Oxidoreductase; Gamma-Glutamylputrescine Oxidase; FAD-Dependent Oxidoreductase; Phytoene Dehydrogenase; Oxidoreductase FAD-Dependent; Sarcosine Oxidase Beta Subunit; D-Amino-Acid Dehydrogenase; Fad Dependent Oxidoreductase; L-Pipecolate Dehydrogenase
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MPRPALSEAILADVAIIGGGFAGLSAAHRLSRLDPTLRIVVLEAGIVGEGPAGANSGFIIDLPHEVSSDDFSGESEGKFC DSVLLQRSAIVLASELAAENGWGKELFDPCGRYSVAMSTEGDKHLEAYSLLLGKMGEAHRLLKRQEIEAVTGSKAFTSGL FSPGTVIIQPAAYISGVADCLKAPVRLCEQTPVLSFERSGDAWLLKTPHGSVLAAKIILANNGHAESFGFFRRRLLHVFT YASLTQEFDPARLGGDRKWAATPALPMGTTVRRINTGGGDRVLIRSRYSYNPGIEIGDAAIRSAGRLHDGKFAHRFPTLA GVGMQYRWGGAMALTHNHVPAFGEIERGVFAACGCNGLGASNSTAAGIAAAERVLGHDSELGRVYSRLAAPVLLPPQPLT TIGAKIHLAWREWRAGAE
Sequences:
>Translated_418_residues MPRPALSEAILADVAIIGGGFAGLSAAHRLSRLDPTLRIVVLEAGIVGEGPAGANSGFIIDLPHEVSSDDFSGESEGKFC DSVLLQRSAIVLASELAAENGWGKELFDPCGRYSVAMSTEGDKHLEAYSLLLGKMGEAHRLLKRQEIEAVTGSKAFTSGL FSPGTVIIQPAAYISGVADCLKAPVRLCEQTPVLSFERSGDAWLLKTPHGSVLAAKIILANNGHAESFGFFRRRLLHVFT YASLTQEFDPARLGGDRKWAATPALPMGTTVRRINTGGGDRVLIRSRYSYNPGIEIGDAAIRSAGRLHDGKFAHRFPTLA GVGMQYRWGGAMALTHNHVPAFGEIERGVFAACGCNGLGASNSTAAGIAAAERVLGHDSELGRVYSRLAAPVLLPPQPLT TIGAKIHLAWREWRAGAE >Mature_417_residues PRPALSEAILADVAIIGGGFAGLSAAHRLSRLDPTLRIVVLEAGIVGEGPAGANSGFIIDLPHEVSSDDFSGESEGKFCD SVLLQRSAIVLASELAAENGWGKELFDPCGRYSVAMSTEGDKHLEAYSLLLGKMGEAHRLLKRQEIEAVTGSKAFTSGLF SPGTVIIQPAAYISGVADCLKAPVRLCEQTPVLSFERSGDAWLLKTPHGSVLAAKIILANNGHAESFGFFRRRLLHVFTY ASLTQEFDPARLGGDRKWAATPALPMGTTVRRINTGGGDRVLIRSRYSYNPGIEIGDAAIRSAGRLHDGKFAHRFPTLAG VGMQYRWGGAMALTHNHVPAFGEIERGVFAACGCNGLGASNSTAAGIAAAERVLGHDSELGRVYSRLAAPVLLPPQPLTT IGAKIHLAWREWRAGAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.-.-.- [C]
Molecular weight: Translated: 44387; Mature: 44256
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRPALSEAILADVAIIGGGFAGLSAAHRLSRLDPTLRIVVLEAGIVGEGPAGANSGFII CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEE DLPHEVSSDDFSGESEGKFCDSVLLQRSAIVLASELAAENGWGKELFDPCGRYSVAMSTE ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEECC GDKHLEAYSLLLGKMGEAHRLLKRQEIEAVTGSKAFTSGLFSPGTVIIQPAAYISGVADC CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEECHHHHHHHHHH LKAPVRLCEQTPVLSFERSGDAWLLKTPHGSVLAAKIILANNGHAESFGFFRRRLLHVFT HHHHHHHHCCCCCEEEECCCCEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHH YASLTQEFDPARLGGDRKWAATPALPMGTTVRRINTGGGDRVLIRSRYSYNPGIEIGDAA HHHHHHCCCCHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCEECHHH IRSAGRLHDGKFAHRFPTLAGVGMQYRWGGAMALTHNHVPAFGEIERGVFAACGCNGLGA HHHCCCCCCCCHHHHCCHHHCCCEEEECCCEEEEECCCCCCCCHHCCCEEEECCCCCCCC SNSTAAGIAAAERVLGHDSELGRVYSRLAAPVLLPPQPLTTIGAKIHLAWREWRAGAE CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEECCCCCHHHCCCEEEEEEHHHCCCCC >Mature Secondary Structure PRPALSEAILADVAIIGGGFAGLSAAHRLSRLDPTLRIVVLEAGIVGEGPAGANSGFII CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEE DLPHEVSSDDFSGESEGKFCDSVLLQRSAIVLASELAAENGWGKELFDPCGRYSVAMSTE ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEECC GDKHLEAYSLLLGKMGEAHRLLKRQEIEAVTGSKAFTSGLFSPGTVIIQPAAYISGVADC CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEECHHHHHHHHHH LKAPVRLCEQTPVLSFERSGDAWLLKTPHGSVLAAKIILANNGHAESFGFFRRRLLHVFT HHHHHHHHCCCCCEEEECCCCEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHH YASLTQEFDPARLGGDRKWAATPALPMGTTVRRINTGGGDRVLIRSRYSYNPGIEIGDAA HHHHHHCCCCHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCEECHHH IRSAGRLHDGKFAHRFPTLAGVGMQYRWGGAMALTHNHVPAFGEIERGVFAACGCNGLGA HHHCCCCCCCCHHHHCCHHHCCCEEEECCCEEEEECCCCCCCCHHCCCEEEECCCCCCCC SNSTAAGIAAAERVLGHDSELGRVYSRLAAPVLLPPQPLTTIGAKIHLAWREWRAGAE CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEECCCCCHHHCCCEEEEEEHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA